RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SLCO2A1Q92959 643 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 HAUS1Q96CS2 278 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 CCDC114Q96M63 670 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 CAPS2Q9BXY5 557 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 TRIM17Q9Y577 477 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 CD48P09326 243 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 GBP1P32455 592 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 ATP1A2P50993 1020 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 BCAT1P54687 386 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 LRRC31Q6UY01 552 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 DSTYKQ6XUX3 929 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 HASPINQ8TF76 798 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 HSPH1Q92598 858 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 KHSRPQ92945 711 aaKnown RBP eCLIP23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 EPB41L4BQ9H329 900 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 DDX43Q9NXZ2 648 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 HMGB1P1B2RPK0 211 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 SETSIPP0DME0 302 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 CETN2P41208 172 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 CDKN2BP42772 138 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 RAB27AP51159 221 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 SLC6A3Q01959 620 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 UPP1Q16831 310 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 HADHQ16836 314 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 TRAF7Q6Q0C0 670 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 FUKQ8N0W3 1084 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 PKNOX2Q96KN3 472 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 PEBP4Q96S96 227 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 TRAIPQ9BWF2 469 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 LRRC4CQ9HCJ2 640 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 DDX56Q9NY93 547 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 USP18Q9UMW8 372 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 hCG_1818297A0A087WSY0 165 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 PTPN1P18031 435 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 PMS2P54278 862 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 TFDP3Q5H9I0 405 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 MDH1BQ5I0G3 518 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 POLNQ7Z5Q5 900 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 RTN4RL1Q86UN2 441 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 ART4Q93070 314 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 TSEN34Q9BSV6 310 aaKnown RBP23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 ASNSD1Q9NWL6 643 aa23.55■■□□□ 1.36
PDLIM2-202ENST00000308354 C3orf70A6NLC5 250 aaPredicted RBP23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 GABRDO14764 452 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 BEST1O76090 585 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 NR1D1P20393 614 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 RABGGTBP53611 331 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 DYNLT1P63172 113 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 SKOR1P84550 965 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 CCDC14Q49A88 953 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 TIGD5Q53EQ6 642 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 PRUNE1Q86TP1 453 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 CNPY3Q9BT09 278 aa23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 MTRF1LQ9UGC7 380 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-202ENST00000308354 B3GAT3O94766 335 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 KRT7P08729 469 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 IRAK1P51617 712 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 SPDYCQ5MJ68 293 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 ECHDC2Q86YB7 292 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 STK32AQ8WU08 396 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 NDRG1Q92597 394 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 SAE1Q9UBE0 346 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 F8W810 466 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 TJP3O95049 919 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 TRUB2O95900 331 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 VPS41P49754 854 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 GNGT1P63211 74 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 CCNG2Q16589 344 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 KDM7AQ6ZMT4 941 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 PAQR9Q6ZVX9 377 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 PABPC3Q9H361 631 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 NGRNQ9NPE2 291 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 CRTAC1Q9NQ79 661 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 ASIC3Q9UHC3 531 aa23.53■■□□□ 1.36
PDLIM2-202ENST00000308354 TFE3P19532 575 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 BRCC3P46736 316 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 UBAP2Q5T6F2 1119 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 SCYL2Q6P3W7 929 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 PIGZQ86VD9 579 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 SLC43A3Q8NBI5 491 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 PGBD4Q96DM1 585 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 HNRNPABQ99729 332 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 MED10Q9BTT4 135 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 DNPEPQ9ULA0 475 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 TP73O15350 636 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 KDELR1P24390 212 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 IFFO1Q0D2I5 559 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 CALCOCO2Q13137 446 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 KCTD6Q8NC69 237 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 ATL2Q8NHH9 583 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 UNC93B1Q9H1C4 597 aa23.52■■□□□ 1.36
PDLIM2-202ENST00000308354 MYBPHLA2RUH7 354 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 SHBGP04278 402 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 HPDP32754 393 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 RPL9P32969 192 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 COPS2P61201 443 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 KRT71Q3SY84 523 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 FOXR1Q6PIV2 292 aa23.51■■□□□ 1.35
PDLIM2-202ENST00000308354 SEMA4AQ9H3S1 761 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms