RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 NIF3L1Q9GZT8 377 aa18.08■□□□□ 0.49
HMGCLL1-202ENST00000308161 SMPD4Q9NXE4 827 aa18.08■□□□□ 0.49
HMGCLL1-202ENST00000308161 SCAMP3O14828 347 aaKnown RBP18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 GADD45BO75293 160 aaPredicted RBP18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 RTN3O95197 1032 aaPredicted RBP18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 SLC5A3P53794 718 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 PMS1P54277 932 aaKnown RBP18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 MAP3K7CLP57077 242 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 WDR44Q5JSH3 913 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 ANKRD40Q6AI12 368 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 UNC93AQ86WB7 457 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 CPA6Q8N4T0 437 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 SCAMP5Q8TAC9 235 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 TWNKQ96RR1 684 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 HINFPQ9BQA5 517 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 PRMT8Q9NR22 394 aaPredicted RBP18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 ARHGAP26Q9UNA1 814 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 CFAP54Q96N23 3096 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 RIF1Q5UIP0 2472 aaKnown RBP18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 ANAPC1Q9H1A4 1944 aa18.07■□□□□ 0.48
HMGCLL1-202ENST00000308161 WDR87Q6ZQQ6 2873 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 PTPRZ1P23471 2315 aaPredicted RBP18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 MBL2P11226 248 aaPredicted RBP18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 GTF2H1P32780 548 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 CCR3P51677 355 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 FKBP3Q00688 224 aaKnown RBP18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 SATB1Q01826 763 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 STIM1Q13586 685 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 GAS6Q14393 721 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 PPP2R5DQ14738 602 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 ZNF528Q3MIS6 628 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 ZNF394Q53GI3 561 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 DGKKQ5KSL6 1271 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 KLHL10Q6JEL2 608 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 OSCP1Q8WVF1 389 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 SEMA4DQ92854 862 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 NT5C1AQ9BXI3 368 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 RNF38Q9H0F5 515 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 SEMA4AQ9H3S1 761 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 CYP3A43Q9HB55 503 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 CHORDC1Q9UHD1 332 aaPredicted RBP18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 MAN1B1Q9UKM7 699 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 CPQQ9Y646 472 aa18.06■□□□□ 0.48
HMGCLL1-202ENST00000308161 LEFTY2O00292 366 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 BIN1O00499 593 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 PSMA7O14818 248 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 STX10O60499 249 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 BEST1O76090 585 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 FAM200BP0CF97 657 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 CXCL12P48061 93 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 PPP3CCP48454 512 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 AMPD2Q01433 879 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 ENPEPQ07075 957 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 CRYBG2Q8N1P7 616 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 FBXL13Q8NEE6 735 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 PDZD8Q8NEN9 1154 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 SPATA20Q8TB22 786 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 ATP2A3Q93084 1043 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 SMOQ99835 787 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 IER2Q9BTL4 223 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 LINC00597Q9H2U6 94 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 ECT2Q9H8V3 914 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 ZSCAN32Q9NX65 697 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 GMIPQ9P107 970 aa18.05■□□□□ 0.48
HMGCLL1-202ENST00000308161 SLC16A3O15427 465 aaKnown RBP18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 GJA4P35212 333 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 ZXDBP98169 803 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 LRRC63Q05C16 580 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 INCA1Q0VD86 236 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 GRSF1Q12849 480 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 CCINQ13939 588 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 COBLL1Q53SF7 1204 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 NAIF1Q69YI7 327 aaPredicted RBP18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 SPEM1Q8N4L4 309 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 ZMIZ2Q8NF64 920 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 CHFRQ96EP1 664 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 CYFIP2Q96F07 1278 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 NACA2Q9H009 215 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 RAB20Q9NX57 234 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 PCDHGA2Q9Y5H1 932 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 FAM186AA6NE01 2351 aa18.04■□□□□ 0.48
HMGCLL1-202ENST00000308161 TNFRSF10BO14763 440 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 CILPO75339 1184 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 OAS1P00973 400 aaKnown RBP18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 PFKLP17858 780 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 SLC7A9P82251 487 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 EML3Q32P44 896 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 CBWD6Q4V339 395 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 CBWD3Q5JTY5 395 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 CBWD5Q5RIA9 395 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 HEATR6Q6AI08 1181 aaKnown RBP18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 FSTL4Q6MZW2 842 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 ARID3AQ99856 593 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 GTPBP4Q9BZE4 634 aaKnown RBP18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 DNAI2Q9GZS0 605 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 CFAP97Q9P2B7 532 aa18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 ARMCX3Q9UH62 379 aaPredicted RBP18.03■□□□□ 0.48
HMGCLL1-202ENST00000308161 MYH10P35580 1976 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms