RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 CYP1B1Q16678 543 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 PPP6R3Q5H9R7 873 aaPredicted RBP16.92■□□□□ 0.3
CCDC8-201ENST00000307522 KLHL35Q6PF15 583 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 HAUS6Q7Z4H7 955 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 ARPINQ7Z6K5 226 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 RILPQ96NA2 401 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 DCLK3Q9C098 648 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 HEY1Q9Y5J3 304 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 MYH11P35749 1972 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 PDLIM1O00151 329 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 STAMBPO95630 424 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 STT3AP46977 705 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 CDK16Q00536 496 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 ZFP28Q8NHY6 868 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 CD101Q93033 1021 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 WNT8AQ9H1J5 351 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 DDX43Q9NXZ2 648 aaKnown RBP16.92■□□□□ 0.3
CCDC8-201ENST00000307522 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.92■□□□□ 0.3
CCDC8-201ENST00000307522 TYROBPO43914 113 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 RPL13P26373 211 aaKnown RBP16.92■□□□□ 0.3
CCDC8-201ENST00000307522 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
CCDC8-201ENST00000307522 PAIP2BQ9ULR5 123 aaKnown RBP16.92■□□□□ 0.3
CCDC8-201ENST00000307522 EMSYQ7Z589 1322 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PRR5-ARHGAP8B1AHC4 643 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 BUD23O43709 281 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PEX1O43933 1283 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 CYP2C8P10632 490 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ARHGAP8P85298 464 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 SFSWAPQ12872 951 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 GPS1Q13098 491 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 LY6KQ17RY6 165 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 RABGAP1LQ5R372 815 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 C11orf63Q6NUN7 778 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ZNF554Q86TJ5 538 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ARID3BQ8IVW6 561 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 TMEM117Q9H0C3 514 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 DENND3A2RUS2 1198 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 TTLL13PA6NNM8 815 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 H3BSA7 217 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ATF7P17544 494 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ZNF200P98182 395 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 TMPRSS6Q8IU80 811 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 CPNE9Q8IYJ1 553 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 COPS5Q92905 334 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PRPF18Q99633 342 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 MIS12Q9H081 205 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 UBIAD1Q9Y5Z9 338 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PDXKO00764 312 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ADCY3O60266 1144 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PSMC2P35998 433 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PPP3CAQ08209 521 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PDE1CQ14123 709 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 KBTBD12Q3ZCT8 623 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 C6orf163Q5TEZ5 329 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ACAD11Q709F0 780 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ZBTB8BQ8NAP8 495 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 TRAPPC12Q8WVT3 735 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 PSPC1Q8WXF1 523 aaKnown RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 SKA1Q96BD8 255 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ZBTB45Q96K62 511 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ARMC7Q9H6L4 198 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 SAE1Q9UBE0 346 aaPredicted RBP16.91■□□□□ 0.3
CCDC8-201ENST00000307522 TUBGCP4Q9UGJ1 667 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
CCDC8-201ENST00000307522 CLPTM1O96005 669 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 BCRP11274 1271 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 COL6A2P12110 1019 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
CCDC8-201ENST00000307522 RPS12P25398 132 aaKnown RBP16.9■□□□□ 0.3
CCDC8-201ENST00000307522 CRABP2P29373 138 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 DSG3P32926 999 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 OSTNP61366 133 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 PTK6Q13882 451 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 ANKDD1AQ495B1 522 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 C1orf228Q6PIY5 440 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 ZCCHC23Q6ZST2 131 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 RNF169Q8NCN4 708 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 STKLD1Q8NE28 680 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 PLEKHO2Q8TD55 490 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 GAB3Q8WWW8 586 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 CATSPER2Q96P56 530 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 XPOTO43592 962 aaKnown RBP16.9■□□□□ 0.3
CCDC8-201ENST00000307522 PMLP29590 882 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 MAPK4P31152 587 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 ACOT2P49753 483 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 NRLP54845 237 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 PDK1Q15118 436 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 Q3C1V9 767 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 B3GNT6Q6ZMB0 384 aa16.9■□□□□ 0.3
CCDC8-201ENST00000307522 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms