RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GET4Q7L5D6 327 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 CCDC124Q96CT7 223 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 MIR1-1HGQ9H1L0 117 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 EML1O00423 815 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PHF2O75151 1096 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ASGR1P07306 291 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 OCM2P0CE71 109 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 CDH8P55286 799 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PDCLQ13371 301 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PTK6Q13882 451 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 CEP68Q76N32 757 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 GSPT2Q8IYD1 628 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 USP18Q9UMW8 372 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 CYP11B1P15538 503 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 GEMP55040 296 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 UGP2Q16851 508 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 KIAA1324Q6UXG2 1013 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 DSG4Q86SJ6 1040 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 LGI2Q8N0V4 545 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ARNTL2Q8WYA1 636 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 MLXIPLQ9NP71 852 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ZDHHC9Q9Y397 364 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 SELPP16109 830 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 MTF1Q14872 753 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 FAM133BQ5BKY9 247 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 KCNT1Q5JUK3 1230 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 TRMT10CQ7L0Y3 403 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 SUSD6Q92537 303 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 DNAJC7Q99615 494 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ASB7Q9H672 318 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 GOLGA8RI6L899 631 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ESRRAP11474 423 aaPredicted RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 SCNN1BP51168 640 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TRIM65Q6PJ69 517 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 NT5DC4Q86YG4 428 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 SLC2A14Q8TDB8 520 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 KIF2CQ99661 725 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 PITPNM3Q9BZ71 974 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 UPF3AQ9H1J1 476 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TPX2Q9ULW0 747 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 AAR2Q9Y312 384 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ARIH2O95376 493 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 EIF2B5Q13144 721 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 NR1I3Q14994 352 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 SLC12A3P55017 1021 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 HIST2H2ACQ16777 129 aaPredicted RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 HIST2H2AA3Q6FI13 130 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ADAM32Q8TC27 787 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 DACT3Q96B18 629 aaPredicted RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TASP1Q9H6P5 420 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 GIMAP4Q9NUV9 329 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 GPATCH2LQ9NWQ4 482 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TRMT6Q9UJA5 497 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 SLC9A3R1O14745 358 aaPredicted RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 E2F6O75461 281 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 NR1D1P20393 614 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 MTM1Q13496 603 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TTLL9Q3SXZ7 439 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 INTUQ9ULD6 942 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 RGPD2P0DJD1 1756 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ABCC6O95255 1503 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 XRN1Q8IZH2 1706 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ESYT3A0FGR9 886 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ZNF185O15231 689 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ATP5BP06576 529 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 NUGGCQ68CJ6 796 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ENGASEQ8NFI3 743 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ANKS1AQ92625 1134 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 C1QTNF7Q9BXJ2 289 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 C11orf49Q9H6J7 331 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 NSMCE4AQ9NXX6 385 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 KIF17Q9P2E2 1029 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 AP4E1Q9UPM8 1137 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 SLC27A5Q9Y2P5 690 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 SPATA31C2B4DYI2 1134 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 IFT88Q13099 833 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 ZPBP2Q6X784 338 aa11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
SYNPO2-201ENST00000307142 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 SRP72O76094 671 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 FGFR1P11362 822 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CAMK2GQ13555 558 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 WSCD1Q658N2 575 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms