RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ASGR2P07307 311 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ALADP13716 330 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 KLK7P49862 253 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 BPIFB4P59827 614 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 POLR2FP61218 127 aaKnown RBP11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 USP46P62068 366 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TAF10Q12962 218 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 HTR4Q13639 388 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 DRAP1Q14919 205 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CNGA2Q16280 664 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 STXBP5Q5T5C0 1151 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 LCLAT1Q6UWP7 414 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 MAB21L3Q8N8X9 362 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SMARCD2Q92925 531 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ASB16Q96NS5 453 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ERGIC2Q96RQ1 377 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 KCNK12Q9HB15 430 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 LRRC4Q9HBW1 653 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 AJAP1Q9UKB5 411 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CNTN6Q9UQ52 1028 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SOBPA7XYQ1 873 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ANHXE9PGG2 379 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 DLL1O00548 723 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TNFRSF10BO14763 440 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CKMP06732 381 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PFKLP17858 780 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PLA2G4AP47712 749 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ZNF445P59923 1031 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 FANCCQ00597 558 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PDE4CQ08493 712 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TDGQ13569 410 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 FAM78AQ5JUQ0 283 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TXNDC8Q6A555 127 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PARM1Q6UWI2 310 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 APTXQ7Z2E3 356 aaKnown RBP11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PIGZQ86VD9 579 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 UBALD2Q8IYN6 164 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SCAMP5Q8TAC9 235 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TFAP2BQ92481 460 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 FGF14Q92915 247 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ELSPBP1Q96BH3 223 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 STK33Q9BYT3 514 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 NACA2Q9H009 215 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 GANQ9H2C0 597 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PDCL3Q9H2J4 239 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 KIF9Q9HAQ2 790 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 NLRC4Q9NPP4 1024 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TLR8Q9NR97 1041 aaKnown RBP11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SIK3Q9Y2K2 1263 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 NCANO14594 1321 aa11.6□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 HHLA1C9JL84 531 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 F8VZ95 297 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 NRG2O14511 850 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CYP26A1O43174 497 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ECI2O75521 394 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 CALCAP01258 141 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 USP17L7P0C7H9 530 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 KRT9P35527 623 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 STAT1P42224 750 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 UBASH3AP57075 661 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 MEA1Q16626 185 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 GPRIN1Q7Z2K8 1008 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 TMEM150AQ86TG1 271 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 MON1AQ86VX9 555 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 FMNL3Q8IVF7 1028 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ARID3BQ8IVW6 561 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ARHGAP18Q8N392 663 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 RNF214Q8ND24 703 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ST13P5Q8NFI4 369 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 DEPDC1BQ8WUY9 529 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ZNF606Q8WXB4 792 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 RSAD2Q8WXG1 361 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 ZSWIM3Q96MP5 696 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 GMIPQ9P107 970 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 DUSP12Q9UNI6 340 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 SCML2Q9UQR0 700 aa11.59□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 MIA3Q5JRA6 1907 aa11.58□□□□□ -0.55
CSPG4P1Y-201ENST00000306641 A0A1W2PQC6 194 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FAM92AA1XBS5 289 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 C2orf78A6NCI8 922 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZNF840PA6NDX5 716 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 HEPACAM2A8MVW5 462 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TEX33O43247 280 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms