RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 MED10Q9BTT4 135 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 MMRN2Q9H8L6 949 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 DMAP1Q9NPF5 467 aaPredicted RBP16.54■□□□□ 0.24
SCAND1-201ENST00000305978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCAND1-201ENST00000305978 ZSCAN32Q9NX65 697 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 ARHGAP26Q9UNA1 814 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 PCDHGA2Q9Y5H1 932 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
SCAND1-201ENST00000305978 CACNA1AO00555 2505 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 CETN3O15182 167 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 RTN3O95197 1032 aaPredicted RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 CCDC130P13994 396 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 GTF2H1P32780 548 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 IFRD2Q12894 506 aaPredicted RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 TAF10Q12962 218 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 ORC1Q13415 861 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 Q6ZS52 159 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 SPEM1Q8N4L4 309 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 TTC16Q8NEE8 873 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 SH3RF2Q8TEC5 729 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 OSCP1Q8WVF1 389 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 ERCC4Q92889 916 aaPredicted RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 SMARCE1Q969G3 411 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 SLITRK1Q96PX8 696 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 FAM126AQ9BYI3 521 aaPredicted RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 APOBEC3GQ9HC16 384 aaKnown RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 TMEM8AQ9HCN3 771 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 KRT82Q9NSB4 513 aa16.53■□□□□ 0.24
SCAND1-201ENST00000305978 DUS2Q9NX74 493 aaKnown RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 HOOK1Q9UJC3 728 aaKnown RBP16.53■□□□□ 0.24
SCAND1-201ENST00000305978 MYO18AQ92614 2054 aaKnown RBP16.52■□□□□ 0.24
SCAND1-201ENST00000305978 TNFRSF10BO14763 440 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 LILRB5O75023 590 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 AP1G2O75843 785 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 OLFM2O95897 454 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 OAS1P00973 400 aaKnown RBP16.52■□□□□ 0.24
SCAND1-201ENST00000305978 YWHAQP27348 245 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 IFNAR2P48551 515 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 SLC7A9P82251 487 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 ZXDBP98169 803 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 SATB1Q01826 763 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 PPP2R5DQ14738 602 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 EML3Q32P44 896 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 KRT39Q6A163 491 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 ZC3H3Q8IXZ2 948 aaKnown RBP16.52■□□□□ 0.24
SCAND1-201ENST00000305978 SYNPOQ8N3V7 929 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 CPA6Q8N4T0 437 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 SUMF1Q8NBK3 374 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 SCAMP5Q8TAC9 235 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 SLC2A14Q8TDB8 520 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 OVCA2Q8WZ82 227 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 TSG101Q99816 390 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.24
SCAND1-201ENST00000305978 NIF3L1Q9GZT8 377 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 CYP3A43Q9HB55 503 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 WNT6Q9Y6F9 365 aa16.52■□□□□ 0.24
SCAND1-201ENST00000305978 TRDMT1O14717 391 aaKnown RBP16.51■□□□□ 0.23
SCAND1-201ENST00000305978 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
SCAND1-201ENST00000305978 CXCL12P48061 93 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 SLC5A3P53794 718 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 AMPD2Q01433 879 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 TMEM196Q5HYL7 178 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 FSTL4Q6MZW2 842 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 C12orf29Q8N999 325 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 CCDC150Q8NCX0 1101 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 PDZD8Q8NEN9 1154 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 ZMIZ2Q8NF64 920 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 ATRIPQ8WXE1 791 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 ATP2A3Q93084 1043 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 FBXO32Q969P5 355 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 SMOQ99835 787 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 RNF38Q9H0F5 515 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 ECT2Q9H8V3 914 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 CSNK1G1Q9HCP0 422 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 IL37Q9NZH6 218 aa16.51■□□□□ 0.23
SCAND1-201ENST00000305978 FAM92AA1XBS5 289 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 LEFTY2O00292 366 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 SLC16A3O15427 465 aaKnown RBP16.5■□□□□ 0.23
SCAND1-201ENST00000305978 STX10O60499 249 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 CILPO75339 1184 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 BEST1O76090 585 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 PAPSS2O95340 614 aaPredicted RBP16.5■□□□□ 0.23
SCAND1-201ENST00000305978 ABL1P00519 1130 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
SCAND1-201ENST00000305978 GJA4P35212 333 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 MXI1P50539 228 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 PMS1P54277 932 aaKnown RBP16.5■□□□□ 0.23
SCAND1-201ENST00000305978 NRLP54845 237 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 LRRC63Q05C16 580 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 ANKRD40Q6AI12 368 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
SCAND1-201ENST00000305978 FBXL13Q8NEE6 735 aa16.5■□□□□ 0.23
SCAND1-201ENST00000305978 SEMA4DQ92854 862 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms