RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 UCMAQ8WVF2 138 aa14.71□□□□□ -0.06
HIPK3-201ENST00000303296 ZNF669Q96BR6 464 aaPredicted RBP14.71□□□□□ -0.06
HIPK3-201ENST00000303296 RNPC3Q96LT9 517 aaKnown RBP14.71□□□□□ -0.06
HIPK3-201ENST00000303296 TEX13BQ9BXU2 312 aa14.71□□□□□ -0.06
HIPK3-201ENST00000303296 MRPS7Q9Y2R9 242 aaKnown RBP14.71□□□□□ -0.06
HIPK3-201ENST00000303296 CDY2AQ9Y6F7 541 aa14.71□□□□□ -0.06
HIPK3-201ENST00000303296 CDY1Q9Y6F8 540 aa14.71□□□□□ -0.06
HIPK3-201ENST00000303296 SMCO3A2RU48 225 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 TRIM49D1C9J1S8 452 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 PABPC1P11940 636 aaKnown RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 EIF2S3LQ2VIR3 472 aaKnown RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ULK2Q8IYT8 1036 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 C9orf72Q96LT7 481 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 TLR7Q9NYK1 1049 aaKnown RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 PHF20L1A8MW92 1017 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 USP17L10C9JJH3 530 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ARID5BQ14865 1188 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ATL2Q8NHH9 583 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 RAD54LQ92698 747 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ZNF512BQ96KM6 892 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 KLHL28Q9NXS3 571 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 RTN2O75298 545 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ADD2P35612 726 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 IER5Q5VY09 327 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 PJA1Q8NG27 643 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 CALR3Q96L12 384 aaKnown RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 QKIQ96PU8 341 aaKnown RBP eCLIP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 NLNQ9BYT8 704 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 TBC1D22BQ9NU19 505 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 PITPNM2Q9BZ72 1349 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 DYNC1LI2O43237 492 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 MAP3K6O95382 1288 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 UBE3CQ15386 1083 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 AGAP9Q5VTM2 703 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 EIF2AK1Q9BQI3 630 aaKnown RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 GOLPH3Q9H4A6 298 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 TOR4AQ9NXH8 423 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 CCDC166P0CW27 439 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 MBL2P11226 248 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 PDIA6Q15084 440 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 DCAF4Q8WV16 495 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 COL26A1Q96A83 441 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 RBM15Q96T37 977 aaKnown RBP eCLIP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 WDCPQ9H6R7 721 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 BLMP54132 1417 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ZNF157P51786 506 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 PLA2G4FQ68DD2 849 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 GLB1LQ6UWU2 654 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 NT5DC3Q86UY8 548 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 FIG4Q92562 907 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ACSF2Q96CM8 615 aaPredicted RBP14.7□□□□□ -0.06
HIPK3-201ENST00000303296 ACOX2Q99424 681 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 EPS8L2Q9H6S3 715 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 GPRC5DQ9NZD1 345 aa14.7□□□□□ -0.06
HIPK3-201ENST00000303296 A0A1W2PQ27 194 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 A0A1W2PQ64 194 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 A0A1W2PQD8 194 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 H3BMM5 538 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 hCG_1984214I3L0E3 225 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SSNA1O43805 119 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 ECE2O60344 883 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 S100A6P06703 90 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 TSPAN19P0C672 248 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 VPS33AQ96AX1 596 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SEPHS2Q99611 448 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 KCTD14Q9BQ13 255 aaPredicted RBP14.69□□□□□ -0.06
HIPK3-201ENST00000303296 ZNF112Q9UJU3 913 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 FAM50BQ9Y247 325 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 FAM187AA6NFU0 413 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 RGS20O76081 388 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 KCNA6P17658 529 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 MARSP56192 900 aaKnown RBP14.69□□□□□ -0.06
HIPK3-201ENST00000303296 GRB14Q14449 540 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 DSN1Q9H410 356 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 CHORDC1Q9UHD1 332 aaPredicted RBP14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SNX4O95219 450 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 CYP2D6P10635 497 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 PIM2Q9P1W9 311 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 GGPS1O95749 300 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 CYP2B6P20813 491 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SERPINB9P50453 376 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 ATP6AP1LQ52LC2 224 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 YME1L1Q96TA2 773 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 UNKQ9C0B0 810 aaKnown RBP14.69□□□□□ -0.06
HIPK3-201ENST00000303296 ELP3Q9H9T3 547 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SHOC2Q9UQ13 582 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SF3B1O75533 1304 aaKnown RBP eCLIP14.69□□□□□ -0.062e-12■■■■■ 275.7
HIPK3-201ENST00000303296 DNAJB2P25686 324 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 TMEM26Q6ZUK4 368 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 SMYD1Q8NB12 490 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 MANSC1Q9H8J5 431 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 USP15Q9Y4E8 981 aaPredicted RBP14.69□□□□□ -0.06
HIPK3-201ENST00000303296 ZBTB7AO95365 584 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 BMP10O95393 424 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 TGM2P21980 687 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 C4orf46Q504U0 113 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 DENND1BQ6P3S1 775 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 AGMOQ6ZNB7 445 aa14.69□□□□□ -0.06
HIPK3-201ENST00000303296 TTC39CQ8N584 583 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms