RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 EIF2AQ9BY44 585 aaKnown RBP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 CPSF3Q9UKF6 684 aaKnown RBP16.31■□□□□ 0.2
CHAF1A-201ENST00000301280 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 TOP3BO95985 862 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 HMGCRP04035 888 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 BCAR1P56945 870 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 XRCC4Q13426 336 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 CA9Q16790 459 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 PDIK1LQ8N165 341 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 MRPL45Q9BRJ2 306 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 SHCBP1LQ9BZQ2 653 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 SUFUQ9UMX1 484 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 G3BP2Q9UN86 482 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 hCG_1818297A0A087WSY0 165 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 CLDN5O00501 218 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 ZBED1O96006 694 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 OSBPP22059 807 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 FOXN2P32314 431 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 ELK3P41970 407 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 RAD23BP54727 409 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 IL31Q6EBC2 164 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 RHBDF2Q6PJF5 856 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 PPP1R36Q96LQ0 422 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 APOL2Q9BQE5 337 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 NXF3Q9H4D5 531 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 HAO1Q9UJM8 370 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 I3L4J1 428 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 PSTPIP1O43586 416 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 USP12O75317 370 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 UPP2O95045 317 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 IL9RQ01113 521 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 SLC1A5Q15758 541 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 SNCBQ16143 134 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 TRIM72Q6ZMU5 477 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 ZNF677Q86XU0 584 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 PYROXD2Q8N2H3 581 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 FAM172AQ8WUF8 416 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 MED10Q9BTT4 135 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 UNKQ9C0B0 810 aaKnown RBP16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 MFHAS1Q9Y4C4 1052 aa16.3■□□□□ 0.2
CHAF1A-201ENST00000301280 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 CBX6O95503 412 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ELF3P78545 371 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 OLIG2Q13516 323 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 RCN2Q14257 317 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 SPARCL1Q14515 664 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 CCL15Q16663 113 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 SLC10A6Q3KNW5 377 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ARHGEF18Q6ZSZ5 1173 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 N4BP2L2Q92802 583 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 USP15Q9Y4E8 981 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ASAP2O43150 1006 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 MGRN1O60291 552 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 INHBAP08476 426 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 RBL1P28749 1068 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 MROH9Q5TGP6 573 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 KATNAL2Q8IYT4 538 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 UNC5BQ8IZJ1 945 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ARFGAP1Q8N6T3 406 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 PPP1R14CQ8TAE6 165 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 FAM167AQ96KS9 214 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 FAM111AQ96PZ2 611 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 SLC17A7Q9P2U7 560 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 DNALI1O14645 258 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 HBP1O60381 514 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ATG7O95352 703 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 KDELR1P24390 212 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ATP5DP30049 168 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ELF1P32519 619 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 GRIA1P42261 906 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 MFSD5Q6N075 450 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 PMF1Q6P1K2 205 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 PHF13Q86YI8 300 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 SLC4A11Q8NBS3 891 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 OR6J1Q8NGC5 347 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 MAML1Q92585 1016 aa16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ZNF395Q9H8N7 513 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 ACTR5Q9H9F9 607 aaPredicted RBP16.29■□□□□ 0.2
CHAF1A-201ENST00000301280 PDHXO00330 501 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 TMEM63AO94886 807 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 MT-ND3P03897 115 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 MYL3P08590 195 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 CDKN2BP42772 138 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 MECRQ9BV79 373 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 XYLT2Q9H1B5 865 aa16.28■□□□□ 0.2
CHAF1A-201ENST00000301280 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms