RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 LCP1P13796 627 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 TAC1P20366 129 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 GRIA1P42261 906 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 AP3M2P53677 418 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CCDC14Q49A88 953 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 DARS2Q6PI48 645 aaKnown RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 SYDE1Q6ZW31 735 aaPredicted RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 TRPM8Q7Z2W7 1104 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 TRABD2AQ86V40 505 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 PNMA8AQ86V59 439 aaPredicted RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 FAM228AQ86W67 206 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 PTPN18Q99952 460 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 KATNBL1Q9H079 304 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 TTC3P53804 2025 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 H7C0C1 242 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 UGT1A9O60656 530 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 IL4RP24394 825 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 ATP5OP48047 213 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CNPY4Q8N129 248 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CCDC63Q8NA47 563 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CCDC110Q8TBZ0 833 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CKAP2Q8WWK9 683 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 UGT1A7Q9HAW7 530 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 UGT1A10Q9HAW8 530 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 UGT1A8Q9HAW9 530 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 SLC17A7Q9P2U7 560 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 C2orf71A6NGG8 1288 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 RNF8O76064 485 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 ITGAVP06756 1048 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CA4P22748 312 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 ACAT1P24752 427 aaKnown RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 YARSP54577 528 aaKnown RBP11.67□□□□□ -0.54
IDH3A-201ENST00000299518 E2F5Q15329 346 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 TP53INP2Q8IXH6 220 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 FUKQ8N0W3 1084 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.543e-8■■■■□ 25.9
IDH3A-201ENST00000299518 MROH8Q9H579 483 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 SLC17A6Q9P2U8 582 aa11.67□□□□□ -0.54
IDH3A-201ENST00000299518 CLDN5O00501 218 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 RBL1P28749 1068 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 GMPRP36959 345 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 GRM1Q13255 1194 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 DPYSL3Q14195 570 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 YTHDF3Q7Z739 585 aaKnown RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 FAM172AQ8WUF8 416 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 DNAJB3Q8WWF6 145 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 NKD2Q969F2 451 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 TBC1D31Q96DN5 1066 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 ZNF518BQ9C0D4 1074 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 KLC4Q9NSK0 619 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 CPA4Q9UI42 421 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 RABGEF1Q9UJ41 708 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 C2CD4BA6NLJ0 364 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 PAPSS1O43252 624 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 ADRA1DP25100 572 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 ELK3P41970 407 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 CCL14Q16627 93 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 BBS12Q6ZW61 710 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 FASTKD5Q7L8L6 764 aaKnown RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 UNC5BQ8IZJ1 945 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 NIPA2Q8N8Q9 360 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 NAT8LQ8N9F0 302 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 KCNN1Q92952 543 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 MCRS1Q96EZ8 462 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 BARX2Q9UMQ3 279 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 A0A1B0GUA9 196 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 KCNN4O15554 427 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 CRADDP78560 199 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 GBE1Q04446 702 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 OLIG2Q13516 323 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 LAMC2Q13753 1193 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 HADHQ16836 314 aaKnown RBP11.66□□□□□ -0.54
IDH3A-201ENST00000299518 CATSPER4Q7RTX7 472 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 OR6J1Q8NGC5 347 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 CFAP36Q96G28 342 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 PCDH9Q9HC56 1237 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 STRIP2Q9ULQ0 834 aa11.66□□□□□ -0.54
IDH3A-201ENST00000299518 MED7O43513 233 aa11.65□□□□□ -0.54
IDH3A-201ENST00000299518 RASSF9O75901 435 aa11.65□□□□□ -0.54
IDH3A-201ENST00000299518 LRRC38Q5VT99 294 aa11.65□□□□□ -0.54
IDH3A-201ENST00000299518 CYB5D1Q6P9G0 228 aa11.65□□□□□ -0.54
IDH3A-201ENST00000299518 GPR142Q7Z601 462 aa11.65□□□□□ -0.54
IDH3A-201ENST00000299518 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.65□□□□□ -0.54
IDH3A-201ENST00000299518 PPTC7Q8NI37 304 aa11.65□□□□□ -0.54
IDH3A-201ENST00000299518 NT5C1AQ9BXI3 368 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms