RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 USP18Q9UMW8 372 aa7.4□□□□□ -1.22
RAG1-201ENST00000299440 DIS3Q9Y2L1 958 aaKnown RBP7.4□□□□□ -1.22
RAG1-201ENST00000299440 E9PCH4 1651 aa7.4□□□□□ -1.22
RAG1-201ENST00000299440 LACTBL1A8MY62 500 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 RASA4BC9J798 803 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 RASA4O43374 803 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 USP2O75604 605 aaPredicted RBP7.4□□□□□ -1.23
RAG1-201ENST00000299440 CYP2C18P33260 490 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 OR1D2P34982 312 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 GPC1P35052 558 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 PTGER2P43116 358 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 GEMIN4P57678 1058 aaKnown RBP7.4□□□□□ -1.23
RAG1-201ENST00000299440 MAP3K10Q02779 954 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 KRT72Q14CN4 511 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 GRIK5Q16478 980 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 INSCQ1MX18 579 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 MUM1Q2TAK8 710 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 LMNTD2Q8IXW0 634 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 C4orf19Q8IY42 314 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 BTBD6Q96KE9 485 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 SENP8Q96LD8 212 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 BBS2Q9BXC9 721 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 ELOVL4Q9GZR5 314 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 UPF3AQ9H1J1 476 aaKnown RBP7.4□□□□□ -1.23
RAG1-201ENST00000299440 NFU1Q9UMS0 254 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 DYRK1BQ9Y463 629 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 RBAK-RBAKDNI3L0D1 243 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 RTP1P59025 263 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 BST2Q10589 180 aaKnown RBP7.4□□□□□ -1.23
RAG1-201ENST00000299440 SETMARQ53H47 684 aaPredicted RBP7.4□□□□□ -1.23
RAG1-201ENST00000299440 GPR158Q5T848 1215 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 MAP3K14Q99558 947 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 NLNQ9BYT8 704 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 DCLK3Q9C098 648 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 FGFR1OP2Q9NVK5 253 aa7.4□□□□□ -1.23
RAG1-201ENST00000299440 GAKO14976 1311 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3DA0A087WVF3 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3IA0A087WXS9 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3EA0A087X179 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3KA0A087X1G2 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3FA6NER0 549 aaPredicted RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3LB9A6J9 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 ZNF189O75820 626 aaPredicted RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3HP0C7X1 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 PCNAP12004 261 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 EIF4BP23588 611 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 SOX11P35716 441 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 FXR2P51116 673 aaKnown RBP eCLIP7.39□□□□□ -1.23
RAG1-201ENST00000299440 GPM6BQ13491 265 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 C6orf118Q5T5N4 469 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3GQ6DHY5 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3CQ6IPX1 549 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CCDC137Q6PK04 289 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TRAPPC11Q7Z392 1133 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TBC1D3Q8IZP1 549 aaPredicted RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 FAM172AQ8WUF8 416 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 MAGED4Q96JG8 741 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 C7orf25Q9BPX7 421 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CLPBQ9H078 707 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CDV3Q9UKY7 258 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 OPHN1O60890 802 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 RAMP2O60895 175 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SUN1O94901 812 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 GCKP35557 465 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 ATP5C1P36542 298 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 SLC1A1P43005 524 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 GLUD2P49448 558 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TARBP2Q15633 366 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 PSRC1Q6PGN9 363 aaPredicted RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TFB1MQ8WVM0 346 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TMEM176AQ96HP8 235 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SLC4A9Q96Q91 983 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 ADGRE3Q9BY15 652 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 PPARGC1AQ9UBK2 798 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 C1QTNF3-AMACRE9PGA6 284 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CST8O60676 142 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 ANXA9O76027 345 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CCDC130P13994 396 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 NDST1P52848 882 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 FAXCQ5TGI0 409 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 NAPEPLDQ6IQ20 393 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SLC44A2Q8IWA5 706 aaPredicted RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 NRSN1Q8IZ57 195 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CALML6Q8TD86 181 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SLC2A14Q8TDB8 520 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 MED8Q96G25 268 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 PPP1R2P1Q96PQ5 205 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 APOL2Q9BQE5 337 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 PORCNQ9H237 461 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 RHBGQ9H310 441 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 WDR41Q9HAD4 459 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SYTL2Q9HCH5 934 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 INTUQ9ULD6 942 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 USP17L7P0C7H9 530 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 GUCA1AP43080 201 aaPredicted RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 EPHB4P54760 987 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SNRPFP62306 86 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms