RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 C1QBPQ07021 282 aaKnown RBP10.61□□□□□ -0.71
GABRB3-201ENST00000299267 IFT88Q13099 833 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 SLC12A1Q13621 1099 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 NOMO2Q5JPE7 1267 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 PPP1R26Q5T8A7 1209 aaPredicted RBP10.61□□□□□ -0.71
GABRB3-201ENST00000299267 ATP11CQ8NB49 1132 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 PPM1EQ8WY54 764 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 LMCD1Q9NZU5 365 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 DDX20Q9UHI6 824 aaKnown RBP10.61□□□□□ -0.71
GABRB3-201ENST00000299267 REXO2Q9Y3B8 237 aaKnown RBP10.61□□□□□ -0.71
GABRB3-201ENST00000299267 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 PFDN6O15212 129 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 KRT37O76014 449 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 GLI1P08151 1106 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 FGFR1P11362 822 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 TFDP3Q5H9I0 405 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 EPM2AIP1Q7L775 607 aaPredicted RBP10.61□□□□□ -0.71
GABRB3-201ENST00000299267 RPTORQ8N122 1335 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 PCDHB18PQ96TA0 734 aa10.61□□□□□ -0.71
GABRB3-201ENST00000299267 LSM7Q9UK45 103 aaKnown RBP10.61□□□□□ -0.71
GABRB3-201ENST00000299267 TSPAN3O60637 253 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 DDR2Q16832 855 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 SLC10A6Q3KNW5 377 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PAPD7Q5XG87 772 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 LPIN3Q9BQK8 851 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TRIM62Q9BVG3 475 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 SRRDQ9UH36 339 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PCDHB12Q9Y5F1 795 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PCDHA2Q9Y5H9 948 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 C3orf70A6NLC5 250 aaPredicted RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PDE2AO00408 941 aaPredicted RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ZNF263O14978 683 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 LSM8O95777 96 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 JCHAINP01591 159 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 KLRC2P26717 231 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PBX1P40424 430 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 GRM5P41594 1212 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 MNAT1P51948 309 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 DDX53Q86TM3 631 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 NT5DC3Q86UY8 548 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 B3GALNT2Q8NCR0 500 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 AGR3Q8TD06 166 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 CALR3Q96L12 384 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TRAIPQ9BWF2 469 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 APOL5Q9BWW9 433 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 L2HGDHQ9H9P8 463 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 CDHR5Q9HBB8 845 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PCDHB5Q9Y5E4 795 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 CCDC195A0A1B0GUA6 201 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 CAPN15O75808 1086 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 MX2P20592 715 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ACLYP53396 1101 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ADCY2Q08462 1091 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 RCN2Q14257 317 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 SLC29A2Q14542 456 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 SPOCD1Q6ZMY3 1216 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TSHZ1Q6ZSZ6 1077 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 C3orf62Q6ZUJ4 267 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 PRUNE1Q86TP1 453 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 C4orf33Q8N1A6 199 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ATAD1Q8NBU5 361 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 CASKIN2Q8WXE0 1202 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ZIC5Q96T25 663 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 IGFLR1Q9H665 355 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ZC3H7BQ9UGR2 993 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 LCMT1Q9UIC8 334 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 MORC2Q9Y6X9 1032 aaPredicted RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 SPTLC1O15269 473 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 CYBBP04839 570 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ATP4AP20648 1035 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 SP100P23497 879 aaPredicted RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 EIF3BP55884 814 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ZNF792Q3KQV3 632 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ITPRIPL1Q6GPH6 555 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 DENND5BQ6ZUT9 1274 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TAS2R42Q7RTR8 314 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TRPM5Q9NZQ8 1165 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 ZFATQ9P243 1243 aa10.6□□□□□ -0.71
GABRB3-201ENST00000299267 TPX2Q9ULW0 747 aaKnown RBP10.6□□□□□ -0.71
GABRB3-201ENST00000299267 COPEO14579 308 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 ATP8B1O43520 1251 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CYP2C18P33260 490 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 PRKCIP41743 596 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CTCFP49711 727 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 GABPB1Q06547 395 aaPredicted RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 MCL1Q07820 350 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 NSUN2Q08J23 767 aaKnown RBP eCLIP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 GRB14Q14449 540 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 MRPS31Q92665 395 aaKnown RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 MCUR1Q96AQ8 359 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 FAM136AQ96C01 138 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 C2CD2Q9Y426 696 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 IQANK1A0A1B0GTG1 560 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 H0Y626 953 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 C4BPAP04003 597 aaKnown RBP10.59□□□□□ -0.71
GABRB3-201ENST00000299267 SETSIPP0DME0 302 aa10.59□□□□□ -0.71
GABRB3-201ENST00000299267 ACRP10323 421 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms