RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 DCTN2Q13561 401 aaKnown RBP14.05□□□□□ -0.16
SKA3-201ENST00000298260 SLC15A2Q16348 729 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 KCNT1Q5JUK3 1230 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 DEFB107AQ8IZN7 70 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 SLITRK1Q96PX8 696 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 CCDC28BQ9BUN5 200 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 ZDHHC7Q9NXF8 308 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 MYH9P35579 1960 aaKnown RBP14.05□□□□□ -0.16
SKA3-201ENST00000298260 TCRBV9S1A1TA0A576 114 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 TMEM221A6NGB7 291 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 CXorf49A8MYA2 514 aaPredicted RBP14.05□□□□□ -0.16
SKA3-201ENST00000298260 TMX2-CTNND1H3BSU7 103 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 I3L4J1 428 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 COPEO14579 308 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 FKBP6O75344 327 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 CACNB3P54284 484 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 BASP1P80723 227 aaKnown RBP14.05□□□□□ -0.16
SKA3-201ENST00000298260 MAMLD1Q13495 774 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 CYTH1Q15438 398 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 PPM1NQ8N819 430 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 DCUN1D1Q96GG9 259 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 ZNF512Q96ME7 567 aaPredicted RBP14.05□□□□□ -0.16
SKA3-201ENST00000298260 GPAMQ9HCL2 828 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 DTNAQ9Y4J8 743 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 IKBKGQ9Y6K9 419 aa14.05□□□□□ -0.16
SKA3-201ENST00000298260 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 ARHGEF35A5YM69 484 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 KBTBD13C9JR72 458 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 ADCY3O60266 1144 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 NFIL3Q16649 462 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 DNAL1Q4LDG9 190 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 SLC44A4Q53GD3 710 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 RNF148Q8N7C7 305 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 MKL1Q969V6 931 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 E2F7Q96AV8 911 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 NT5C1BQ96P26 610 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 LXNQ9BS40 222 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 DHRS4Q9BTZ2 278 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 KCNK4Q9NYG8 393 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 POMPQ9Y244 141 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 SH3GLB1Q9Y371 365 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
SKA3-201ENST00000298260 H3BNX3 289 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 TRMUO75648 421 aaKnown RBP14.04□□□□□ -0.16
SKA3-201ENST00000298260 CFBP00751 764 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 RPL10P27635 214 aaKnown RBP14.04□□□□□ -0.16
SKA3-201ENST00000298260 ALDH1B1P30837 517 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 SHMT1P34896 483 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 ALDH1A3P47895 512 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 MRPS5P82675 430 aaKnown RBP14.04□□□□□ -0.16
SKA3-201ENST00000298260 LMNB2Q03252 620 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 SNAPC2Q13487 334 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 ATG14Q6ZNE5 492 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 SH2D5Q6ZV89 423 aa14.04□□□□□ -0.16
SKA3-201ENST00000298260 RNF168Q8IYW5 571 aaPredicted RBP14.04□□□□□ -0.16
SKA3-201ENST00000298260 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 NHSQ6T4R5 1651 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 IGLV3-22A0A075B6J6 115 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 ITM2AO43736 263 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 CRTAMO95727 393 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 INHBAP08476 426 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SRGAP2CP0DJJ0 459 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SRGAP2BP0DMP2 458 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 ARP10275 920 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SOX10P56693 466 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 GABPAQ06546 454 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SNRNP35Q16560 246 aaKnown RBP14.03□□□□□ -0.16
SKA3-201ENST00000298260 GPATCH4Q5T3I0 446 aaKnown RBP14.03□□□□□ -0.16
SKA3-201ENST00000298260 KATNAL2Q8IYT4 538 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 CDH22Q9UJ99 828 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 TELO2Q9Y4R8 837 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 E2F8A0AVK6 867 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 XPO1O14980 1071 aaKnown RBP14.03□□□□□ -0.16
SKA3-201ENST00000298260 GAS7O60861 476 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 TOM1L1O75674 476 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 POLR2MP0CAP2 368 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 RBP3P10745 1247 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 PHBP35232 272 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SREBF1P36956 1147 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 ENTPD1P49961 510 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SCNN1DP51172 638 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 VCPP55072 806 aaKnown RBP14.03□□□□□ -0.16
SKA3-201ENST00000298260 NAA20P61599 178 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 CDKL1Q00532 357 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 OASLQ15646 514 aaKnown RBP14.03□□□□□ -0.16
SKA3-201ENST00000298260 CNGA3Q16281 694 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 C16orf46Q6P387 395 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 PADI6Q6TGC4 694 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 CHSY1Q86X52 802 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 NUDCD3Q8IVD9 361 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 EXD1Q8NHP7 514 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 SLC35B4Q969S0 331 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 ZNF778Q96MU6 729 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 WWP1Q9H0M0 922 aa14.03□□□□□ -0.16
SKA3-201ENST00000298260 UNC45AQ9H3U1 944 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms