RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 EXOC1LA0A1B0GW35 172 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 LIASO43766 372 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SPATA31D3P0C874 917 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 PTPRAP18433 802 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 MYL6P60660 151 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 CAV1Q03135 178 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 LSAMPQ13449 338 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 DCUN1D2Q6PH85 259 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SPATA31D4Q6ZUB0 917 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 RIBC1Q8N443 379 aaPredicted RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 PTCD3Q96EY7 689 aaKnown RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 PORCNQ9H237 461 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SNCAIPQ9Y6H5 919 aa16.29■□□□□ 0.2
UBAP1-201ENST00000297661 MYH9P35579 1960 aaKnown RBP16.29■□□□□ 0.2
UBAP1-201ENST00000297661 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 HAUS5O94927 633 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 OATP04181 439 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 MAGEA8P43361 318 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
UBAP1-201ENST00000297661 THOC5Q13769 683 aaKnown RBP16.28■□□□□ 0.2
UBAP1-201ENST00000297661 KCNT1Q5JUK3 1230 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 EXD1Q8NHP7 514 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 CENPKQ9BS16 269 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 VPS37BQ9H9H4 285 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 PARVAQ9NVD7 372 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 CSADQ9Y600 493 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 COMMD3-BMI1R4GMX3 469 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 ARID2Q68CP9 1835 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 A0A0B4J269 797 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 KRT15P19012 456 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 GCAP28676 217 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 NR1H3Q13133 447 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 PKN2Q16513 984 aaKnown RBP16.28■□□□□ 0.2
UBAP1-201ENST00000297661 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
UBAP1-201ENST00000297661 PDCD7Q8N8D1 485 aaKnown RBP16.28■□□□□ 0.2
UBAP1-201ENST00000297661 ZNF75CPQ92670 426 aaPredicted RBP16.28■□□□□ 0.2
UBAP1-201ENST00000297661 SMC6Q96SB8 1091 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 CGRRF1Q99675 332 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 KIAA1586Q9HCI6 787 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 KANSL3Q9P2N6 904 aa16.28■□□□□ 0.2
UBAP1-201ENST00000297661 SRGAP2CP0DJJ0 459 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 CDK7P50613 346 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 CAPSQ13938 189 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 SYCP2LQ5T4T6 812 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 IZUMO2Q6UXV1 221 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 RFX8Q6ZV50 586 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 ZBED8Q8IZ13 594 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 SLC10A4Q96EP9 437 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 NSL1Q96IY1 281 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 SMG5Q9UPR3 1016 aaKnown RBP16.27■□□□□ 0.2
UBAP1-201ENST00000297661 OTOFQ9HC10 1997 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 TRPM7Q96QT4 1865 aa16.27■□□□□ 0.2
UBAP1-201ENST00000297661 MAFGO15525 162 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 DKC1O60832 514 aaKnown RBP eCLIP16.27■□□□□ 0.192e-6■■■■□ 19.8
UBAP1-201ENST00000297661 SETSIPP0DME0 302 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 MMP8P22894 467 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 GJA5P36382 358 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 NRLP54845 237 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 C1QTNF8P60827 252 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 OVGP1Q12889 678 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 DNAJC24Q6P3W2 148 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 RINLQ6ZS11 566 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 ZCCHC9Q8N567 271 aaKnown RBP16.27■□□□□ 0.19
UBAP1-201ENST00000297661 RFWD2Q8NHY2 731 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 TFAP2BQ92481 460 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 MMADHCQ9H3L0 296 aaPredicted RBP16.27■□□□□ 0.19
UBAP1-201ENST00000297661 ACAD9Q9H845 621 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 SCINQ9Y6U3 715 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 BRCA2P51587 3418 aa16.27■□□□□ 0.19
UBAP1-201ENST00000297661 TMEM191CA6NGB0 347 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 SGK1O00141 431 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 TMEM191BP0C7N4 346 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 TROVE2P10155 538 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBAP1-201ENST00000297661 AMPD1P23109 780 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 CCNFP41002 786 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 CETN2P41208 172 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 APLP1P51693 650 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 SLC18A1P54219 525 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 EFTUD2Q15029 972 aaKnown RBP eCLIP16.26■□□□□ 0.199e-6■□□□□ 9.6
UBAP1-201ENST00000297661 XRRA1Q6P2D8 792 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 ANKRD13AQ8IZ07 590 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 ZNF398Q8TD17 642 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 CCDC28BQ9BUN5 200 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 DHX33Q9H6R0 707 aaKnown RBP16.26■□□□□ 0.19
UBAP1-201ENST00000297661 TAS2R1Q9NYW7 299 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 HEY2Q9UBP5 337 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 IP6K2Q9UHH9 426 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 STYXL1Q9Y6J8 313 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 A0A0G2JND7 137 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 GJB1P08034 283 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 FAM163BP0C2L3 166 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 TPP2P29144 1249 aaPredicted RBP16.26■□□□□ 0.19
UBAP1-201ENST00000297661 RAP1GAPP47736 663 aa16.26■□□□□ 0.19
UBAP1-201ENST00000297661 INHBCP55103 352 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms