RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 A0A1W2PPM1 405 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 E7ESA3 106 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 H3BRB1 525 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PIAS1O75925 651 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PFKMP08237 780 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PDGFRAP16234 1089 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PHBP35232 272 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 RPA3P35244 121 aaPredicted RBP9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 GEMIN4P57678 1058 aaKnown RBP9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 BASP1P80723 227 aaKnown RBP9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 RBP5P82980 135 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 KYAT1Q16773 422 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 LCLAT1Q6UWP7 414 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 ZC3H18Q86VM9 953 aaKnown RBP9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PARP9Q8IXQ6 854 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 ATP11CQ8NB49 1132 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 FBXO36Q8NEA4 188 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 RMDN2Q96LZ7 410 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 CNPY3Q9BT09 278 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 NT5C1AQ9BXI3 368 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PITPNM3Q9BZ71 974 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 PPCSQ9HAB8 311 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 VTA1Q9NP79 307 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 XPO7Q9UIA9 1087 aaKnown RBP9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 GRID1Q9ULK0 1009 aa9.73□□□□□ -0.85
UBLCP1-201ENST00000296786 ENDOD1O94919 500 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 STAU1O95793 577 aaKnown RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 CA4P22748 312 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 RGS7P49802 495 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 SLC18A1P54219 525 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 MGAT5Q09328 741 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 DNAJC3Q13217 504 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 SNAPC2Q13487 334 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 DPYSL3Q14195 570 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 SPARCL1Q14515 664 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 NOMO1Q15155 1222 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 RASA2Q15283 850 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 BBS9Q3SYG4 887 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 PPP1R26Q5T8A7 1209 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 C3orf62Q6ZUJ4 267 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 PDIK1LQ8N165 341 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 FITM2Q8N6M3 262 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 CCDC63Q8NA47 563 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 GPRC5AQ8NFJ5 357 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 SPOCK2Q92563 424 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 EMID1Q96A84 441 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 PLCD4Q9BRC7 762 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 MAK16Q9BXY0 300 aaKnown RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 CXCL16Q9H2A7 254 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 ZMYND8Q9ULU4 1186 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 SMG5Q9UPR3 1016 aaKnown RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 TYROBPO43914 113 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 PRPSAP2O60256 369 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 ELF3P78545 371 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 ATP11AP98196 1134 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 ROR1Q01973 937 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 GOLGA7BQ2TAP0 167 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 GALNTL6Q49A17 601 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 MARCH8Q5T0T0 291 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 FAM182AQ5T1J6 154 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 SYCP2LQ5T4T6 812 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 DARS2Q6PI48 645 aaKnown RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 NT5DC4Q86YG4 428 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 GRAMD1AQ96CP6 724 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 PAFAH2Q99487 392 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 KATNBL1Q9H079 304 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 ACSS3Q9H6R3 686 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 GBA2Q9HCG7 927 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 CD248Q9HCU0 757 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 KLHL14Q9P2G3 628 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 FETUBQ9UGM5 382 aa9.72□□□□□ -0.85
UBLCP1-201ENST00000296786 RBM47A0AV96 593 aaKnown RBP9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 SMAPO00193 183 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 PPEF2O14830 753 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 HGSO14964 777 aaPredicted RBP9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 MGRN1O60291 552 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 KRT4P19013 534 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 NCALDP61601 193 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 CCNA1P78396 465 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 SLC1A5Q15758 541 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 GRIK4Q16099 956 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 SNCBQ16143 134 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 PDK4Q16654 411 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 CCDC14Q49A88 953 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 PMF1Q6P1K2 205 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 ADGRD1Q6QNK2 874 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 TBC1D1Q86TI0 1168 aaPredicted RBP9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 PALM2Q8IXS6 379 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 TTC39CQ8N584 583 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 MIS12Q9H081 205 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 FAM124BQ9H5Z6 455 aaPredicted RBP9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 ECT2Q9H8V3 914 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 RXFP1Q9HBX9 757 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 KIAA1257Q9ULG3 409 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms