RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 NADKO95544 446 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ANXA13P27216 316 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 IL13P35225 146 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 CDC73Q6P1J9 531 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ART5Q96L15 291 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 WRNIP1Q96S55 665 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 WHRNQ9P202 907 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 IFI35P80217 286 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SLCO6A1Q86UG4 719 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 NRBP2Q9NSY0 501 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 IQCMA0A1B0GVH7 501 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 GLRBP48167 497 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ZNF667Q5HYK9 610 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 BHLHB9Q6PI77 547 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 CHMP1BQ7LBR1 199 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 FAM228AQ86W67 206 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 OR6B3Q8NGW1 331 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 S100ZQ8WXG8 99 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 C9orf16Q9BUW7 83 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 GRID1Q9ULK0 1009 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SERPIND1P05546 499 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SRGNP10124 158 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 EPN2O95208 641 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 RFX1P22670 979 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SPRP35270 261 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 USP39Q53GS9 565 aaKnown RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 TTC27Q6P3X3 843 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 COMMD8Q9NX08 183 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 TULP2O00295 520 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 H2AFYO75367 372 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC26A3P40879 764 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 MTERF2Q49AM1 385 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 FAM98BQ52LJ0 330 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 LCP1P13796 627 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 CEBPGP53567 150 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ITGA1P56199 1179 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 RPL10AP62906 217 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 TCIRG1Q13488 830 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 FAM47CQ5HY64 1035 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 TTC7BQ86TV6 843 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 RNF38Q9H0F5 515 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 GIN1Q9NXP7 522 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 KDM4BO94953 1096 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 CSPG5O95196 566 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SEPHS1P49903 392 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 C2CD6Q53TS8 623 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 CRELD2Q6UXH1 353 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 KRT28Q7Z3Y7 464 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ZBTB38Q8NAP3 1195 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PTPN7P35236 360 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PRIM2P49643 509 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PEX3P56589 373 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ANKS3Q6ZW76 656 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 EXOC3L1Q86VI1 746 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ATG4AQ8WYN0 398 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 TSEN34Q9BSV6 310 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 NPC1L1Q9UHC9 1359 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC1A1P43005 524 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 DENND5AQ6IQ26 1287 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ARHGEF26Q96DR7 871 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PAFAH2Q99487 392 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 LDLRP01130 860 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ADORA2BP29275 332 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 STAT3P40763 770 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC13A5Q86YT5 568 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PPIL6Q8IXY8 311 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 OSCP1Q8WVF1 389 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 MCUBQ9NWR8 336 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ETFBP38117 255 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SCNN1DP51172 638 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 BST2Q10589 180 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 ZIK1Q3SY52 487 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 DHRSXQ8N5I4 330 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 BDH2Q9BUT1 245 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC16A4O15374 487 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 TRPC4APQ8TEL6 797 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 CHORDC1Q9UHD1 332 aaPredicted RBP12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC26A4O43511 780 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 UPP2O95045 317 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 CCT8P50990 548 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 PCSK7Q16549 785 aa12.13□□□□□ -0.47
SHROOM3-201ENST00000296043 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms