RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TREML2Q5T2D2 321 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 COILP38432 576 aaPredicted RBP18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 UGT3A1Q6NUS8 523 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 BLOC1S5Q8TDH9 187 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZFP69BQ9UJL9 534 aa18.38■□□□□ 0.53
CDC42EP3-201ENST00000295324 GYG2O15488 501 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 KCNJ1P48048 391 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 TBX4P57082 545 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 TATDN2Q93075 761 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 ERP44Q9BS26 406 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PDGFDQ9GZP0 370 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PKD2L2Q9NZM6 624 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 CD274Q9NZQ7 290 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 USP18Q9UMW8 372 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 TNFSF13BQ9Y275 285 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 SNCAIPQ9Y6H5 919 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 MAFO75444 373 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PYGBP11216 843 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PAX3P23760 479 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 WASHC5Q12768 1159 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 C2CD6Q53TS8 623 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 C3orf62Q6ZUJ4 267 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 TEKT4Q8WW24 435 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZNF606Q8WXB4 792 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 CAPNS2Q96L46 248 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 CCDC138Q96M89 665 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 SERPINB11Q96P15 392 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PGLYRP2Q96PD5 576 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 TASP1Q9H6P5 420 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 MRPL17Q9NRX2 175 aaKnown RBP18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 MAP3K13O43283 966 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 AGTP01019 485 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 MAGEA4P43358 317 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLC12A3P55017 1021 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZNF284Q2VY69 593 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PABPC1LQ4VXU2 614 aaKnown RBP18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLC47A2Q86VL8 602 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 BLOC1S4Q9NUP1 217 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 NDE1Q9NXR1 346 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 RHOBTB1O94844 696 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 PROSCO94903 275 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 YWHAZP63104 245 aaKnown RBP18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 CLEC16AQ2KHT3 1053 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 CCNJLQ8IV13 435 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 FAM129AQ9BZQ8 928 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 SCUBE2Q9NQ36 999 aa18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP3-201ENST00000295324 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 NCAM2O15394 837 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 CCDC22O60826 627 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 E2F6O75461 281 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 SNRPAP09012 282 aaKnown RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 GRAMD1AQ96CP6 724 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 SENP8Q96LD8 212 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 DEFB118Q96PH6 123 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 TEX12Q9BXU0 123 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 RBM12Q9NTZ6 932 aaKnown RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 ANGPTL2Q9UKU9 493 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 ADCY6O43306 1168 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZNF268Q14587 947 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZBTB45Q96K62 511 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 PLEKP08567 350 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 CCL23P55773 120 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 CCDC149Q6ZUS6 474 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 CXorf38Q8TB03 319 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 XPO6Q96QU8 1125 aaKnown RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 IGFLR1Q9H665 355 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 YDJCA8MPS7 323 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 GRK4P32298 578 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 HSPA9P38646 679 aaKnown RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 SCNN1GP51170 649 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 ITGA8P53708 1063 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 GJC2Q5T442 439 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 C1orf186Q6ZWK4 172 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 MTMR14Q8NCE2 650 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 BCL9LQ86UU0 1499 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 ACADMP11310 421 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 WEE1P30291 646 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 VCPP55072 806 aaKnown RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 CREMQ03060 361 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 SRPK1Q96SB4 655 aaKnown RBP18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 WWP1Q9H0M0 922 aa18.36■□□□□ 0.53
CDC42EP3-201ENST00000295324 SPRYD7Q5W111 196 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 GOLGA8RI6L899 631 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 CBX4O00257 560 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZBTB39O15060 712 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 GLRA2P23416 452 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 ADIGQ0VDE8 80 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 DUSP28Q4G0W2 176 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 CES5AQ6NT32 575 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 LRRC37BQ96QE4 947 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 TBCBQ99426 244 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 GPATCH2LQ9NWQ4 482 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 TRIM66O15016 1216 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 ABCE1P61221 599 aaKnown RBP18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 PTK7Q13308 1070 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLC39A12Q504Y0 691 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms