RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 MTA2O94776 668 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 SERPINB5P36952 375 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 CTCFP49711 727 aaPredicted RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 FCHO2Q0JRZ9 810 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 CCNT2O60583 730 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 BCAP31P51572 246 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 CCDC54Q8NEL0 328 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 ATP6V1C2Q8NEY4 427 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 SENP7Q9BQF6 1050 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 EIF2AK1Q9BQI3 630 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 CLPBQ9H078 707 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 NEK6Q9HC98 313 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 CD4P01730 458 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 IL6P05231 212 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 CSF1RP07333 972 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 HOXC12P31275 282 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 RAPSNQ13702 412 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 BOP1Q14137 746 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 PRPF39Q86UA1 669 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 SLC44A5Q8NCS7 719 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 FAR1Q8WVX9 515 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 PUS7LQ9H0K6 701 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 TRABDQ9H4I3 376 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 METTL5Q9NRN9 209 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 MYBL1P10243 752 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 GLRBP48167 497 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 NDUFA5Q16718 116 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 ALG11Q2TAA5 492 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 WLSQ5T9L3 541 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 MROH9Q5TGP6 573 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SLX4-201ENST00000294008 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 PYCARDQ9ULZ3 195 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 TBKBP1A7MCY6 615 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 FAM220BPB1ANY3 271 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 CLK3P49761 638 aaKnown RBP12.85□□□□□ -0.35
SLX4-201ENST00000294008 OXCT1P55809 520 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 FAM124AQ86V42 546 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
SLX4-201ENST00000294008 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
SLX4-201ENST00000294008 SCP2P22307 547 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 PLA2G4FQ68DD2 849 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 RSPH1Q8WYR4 309 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 DUSP12Q9UNI6 340 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 TRIM24O15164 1050 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 PCSK1P29120 753 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 EPHB2P29323 1055 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 GGCXP38435 758 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 KIF23Q02241 960 aaPredicted RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 CASP8Q14790 479 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 RAD54LQ92698 747 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 ATXN3LQ9H3M9 355 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 CHORDC1Q9UHD1 332 aaPredicted RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 AOX1Q06278 1338 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 MYO3BQ8WXR4 1341 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 CENPXA8MT69 81 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 SPPL2AQ8TCT8 520 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 FANCEQ9HB96 536 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 RHBDL2Q9NX52 303 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 SMPD4Q9NXE4 827 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 TMEM138Q9NPI0 162 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 INTS10Q9NVR2 710 aaKnown RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 UGP2Q16851 508 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 LONRF1Q17RB8 773 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 ADGRF4Q8IZF3 695 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 TRPV3Q8NET8 790 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 ZNF669Q96BR6 464 aaPredicted RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 ASXL1Q8IXJ9 1541 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 NR5A2O00482 541 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 SCN2BO60939 215 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 DBIP07108 87 aaKnown RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 RHOCP08134 193 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 CCNG1P51959 295 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 C1DQ13901 141 aaKnown RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 FAM228AQ86W67 206 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 SEC16BQ96JE7 1060 aa12.84□□□□□ -0.35
SLX4-201ENST00000294008 TRNT1Q96Q11 434 aaKnown RBP12.84□□□□□ -0.35
SLX4-201ENST00000294008 ATG7O95352 703 aa12.83□□□□□ -0.36
SLX4-201ENST00000294008 POLBP06746 335 aa12.83□□□□□ -0.36
SLX4-201ENST00000294008 ADD2P35612 726 aa12.83□□□□□ -0.36
SLX4-201ENST00000294008 CCT8P50990 548 aa12.83□□□□□ -0.36
SLX4-201ENST00000294008 KNOP1Q1ED39 458 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms