RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 SMYD3Q9H7B4 428 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 TCRBV9S1A1TA0A576 114 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 MCF2LO15068 1137 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 TNNC2P02585 160 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 PYGBP11216 843 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 RASSF2P50749 326 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 CDCA2Q69YH5 1023 aaPredicted RBP17.6■□□□□ 0.41
CHRNE-201ENST00000293780 DARS2Q6PI48 645 aaKnown RBP17.6■□□□□ 0.41
CHRNE-201ENST00000293780 DPH6Q7L8W6 267 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
CHRNE-201ENST00000293780 FNIP1Q8TF40 1166 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 TRAPPC12Q8WVT3 735 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 ANKRD36BP1Q96IX9 119 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 CYTH2Q99418 400 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 TSSK1BQ9BXA7 367 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 KCNK13Q9HB14 408 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 FBXO6Q9NRD1 293 aaPredicted RBP17.6■□□□□ 0.41
CHRNE-201ENST00000293780 SIX4Q9UIU6 781 aa17.6■□□□□ 0.41
CHRNE-201ENST00000293780 PPP1R12AO14974 1030 aaPredicted RBP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 CXCL8P10145 99 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 BGNP21810 368 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 YWHAGP61981 247 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 IER5Q5VY09 327 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 FAM160B1Q5W0V3 765 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 SLC4A11Q8NBS3 891 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 LRRN4Q8WUT4 740 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 NAF1Q96HR8 494 aaKnown RBP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 CADM1Q9BY67 442 aaKnown RBP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 FRMD8P1Q9BZ68 369 aaPredicted RBP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 PHACTR1Q9C0D0 580 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 ASCC2Q9H1I8 757 aaPredicted RBP17.59■□□□□ 0.41
CHRNE-201ENST00000293780 BATF3Q9NR55 127 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 PIM2Q9P1W9 311 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 SOWAHBA6NEL2 793 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 ZBTB42B2RXF5 422 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 MICAL2O94851 1124 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 ETV4P43268 484 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 TRIM68Q6AZZ1 485 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 SH2D5Q6ZV89 423 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 SEPT1Q8WYJ6 367 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 NLRP4Q96MN2 994 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 ELOVL4Q9GZR5 314 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 R3HDMLQ9H3Y0 253 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 LNPEPQ9UIQ6 1025 aa17.59■□□□□ 0.41
CHRNE-201ENST00000293780 MED7O43513 233 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 SERPINB3P29508 390 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 NEK3P51956 506 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 ARFIP2P53365 341 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 CDH6P55285 790 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 SURF1Q15526 300 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 TMEM132AQ24JP5 1023 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 ANGEL2Q5VTE6 544 aaKnown RBP17.58■□□□□ 0.41
CHRNE-201ENST00000293780 C1orf228Q6PIY5 440 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 ZBTB8OSQ8IWT0 167 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 UBA3Q8TBC4 463 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 ZNF398Q8TD17 642 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 ALKBH8Q96BT7 664 aaKnown RBP17.58■□□□□ 0.41
CHRNE-201ENST00000293780 LBHD1Q9BQE6 289 aaPredicted RBP17.58■□□□□ 0.41
CHRNE-201ENST00000293780 TRIM55Q9BYV6 548 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 TLE6Q9H808 572 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 PTPRHQ9HD43 1115 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 SAR1AQ9NR31 198 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 TEX264Q9Y6I9 313 aa17.58■□□□□ 0.41
CHRNE-201ENST00000293780 INO80B-WBP1J3KQ70 363 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 MAP3K6O95382 1288 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 NFICP08651 508 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 PROZP22891 400 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 ZNF200P98182 395 aaPredicted RBP17.58■□□□□ 0.4
CHRNE-201ENST00000293780 C15orf59Q2T9L4 293 aaPredicted RBP17.58■□□□□ 0.4
CHRNE-201ENST00000293780 KHDC1Q4VXA5 237 aaKnown RBP17.58■□□□□ 0.4
CHRNE-201ENST00000293780 ZNF667Q5HYK9 610 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 WASHC2DQ5SRD0 308 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 ATF7IP2Q5U623 682 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 TRNP1Q6NT89 227 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 MPZL3Q6UWV2 235 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 C1orf127Q8N9H9 656 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 SLC44A1Q8WWI5 657 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 TMEM120AQ9BXJ8 343 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 INO80BQ9C086 356 aaPredicted RBP17.58■□□□□ 0.4
CHRNE-201ENST00000293780 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHRNE-201ENST00000293780 LRRC42Q9Y546 428 aa17.58■□□□□ 0.4
CHRNE-201ENST00000293780 IQANK1A0A1B0GTG1 560 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 B4GALT4O60513 344 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 CSDE1O75534 798 aaKnown RBP17.57■□□□□ 0.4
CHRNE-201ENST00000293780 GRAP2O75791 330 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 RNF8O76064 485 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 ARIH2O95376 493 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 DHRS4L1P0CG22 281 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 NEFHP12036 1026 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 ROR1Q01973 937 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 KCNJ11Q14654 390 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 SPDYAQ5MJ70 313 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 FAM102AQ5T9C2 384 aaPredicted RBP17.57■□□□□ 0.4
CHRNE-201ENST00000293780 FAXCQ5TGI0 409 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 NAIF1Q69YI7 327 aaPredicted RBP17.57■□□□□ 0.4
CHRNE-201ENST00000293780 DSTYKQ6XUX3 929 aa17.57■□□□□ 0.4
CHRNE-201ENST00000293780 CDHR3Q6ZTQ4 885 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms