RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ZDHHC14Q8IZN3 488 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 TMEM86AQ8N2M4 240 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 GSTCDQ8NEC7 633 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 OR6B3Q8NGW1 331 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 GRK7Q8WTQ7 553 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 TFAP2BQ92481 460 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 HOMER3Q9NSC5 361 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 KANSL3Q9P2N6 904 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.65■□□□□ 0.42
CPSF4-201ENST00000292476 TRIP11Q15643 1979 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 TRIOBPQ9H2D6 2365 aa17.65■□□□□ 0.42
CPSF4-201ENST00000292476 A8MXQ7 604 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 E7EVH7 732 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 PPEF2O14830 753 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 AGTP01019 485 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 RRM1P23921 792 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 GNL1P36915 607 aaPredicted RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 FAM189BP81408 668 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 CAV1Q03135 178 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 TTC31Q49AM3 519 aaPredicted RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 LCLAT1Q6UWP7 414 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 GLB1LQ6UWU2 654 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 TRMT10CQ7L0Y3 403 aaKnown RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 ZNF598Q86UK7 904 aaKnown RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 RNF169Q8NCN4 708 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 SPATA18Q8TC71 538 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 SEPT8Q92599 483 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 LPPQ93052 612 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 ROPN1BQ9BZX4 212 aaPredicted RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 ELAC1Q9H777 363 aaKnown RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 ROPN1Q9HAT0 212 aaPredicted RBP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 BCCIPQ9P287 314 aaKnown RBP eCLIP17.64■□□□□ 0.42
CPSF4-201ENST00000292476 ANAPC7Q9UJX3 599 aa17.64■□□□□ 0.42
CPSF4-201ENST00000292476 C9IYK1 514 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 O00370 1275 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 SETSIPP0DME0 302 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 WARSP23381 471 aaKnown RBP17.64■□□□□ 0.41
CPSF4-201ENST00000292476 SCNN1GP51170 649 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 CALCOCO2Q13137 446 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 PLEKHA7Q6IQ23 1121 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 MMS22LQ6ZRQ5 1243 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 CRYBG2Q8N1P7 616 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 URGCPQ8TCY9 931 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
CPSF4-201ENST00000292476 HESX1Q9UBX0 185 aa17.64■□□□□ 0.41
CPSF4-201ENST00000292476 PSTPIP1O43586 416 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 CFHP08603 1231 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 BMP8BP34820 402 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 CCL23P55773 120 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 TUSC3Q13454 348 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 ARHGAP17Q68EM7 881 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 MFSD5Q6N075 450 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 ADGRF2Q8IZF7 708 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 P3H4Q92791 437 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 TWNKQ96RR1 684 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 MRPL45Q9BRJ2 306 aaKnown RBP17.63■□□□□ 0.41
CPSF4-201ENST00000292476 SYNCQ9H7C4 482 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 GOLGA2P5Q9HBQ8 144 aa17.63■□□□□ 0.41
CPSF4-201ENST00000292476 MEIS3P2A8K0S8 358 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 M0QYV0 167 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 CYB561D2O14569 222 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 MICAL2O94851 1124 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 FSBPO95073 299 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 ITIH2P19823 946 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 MMP13P45452 471 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 LHX1P48742 406 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 GSCP56915 257 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-201ENST00000292476 FPGSQ05932 587 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 PTK6Q13882 451 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 MBTPS1Q14703 1052 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 PLEKHG4Q58EX7 1191 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 TNFAIP8L3Q5GJ75 292 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 HABP4Q5JVS0 413 aaKnown RBP17.62■□□□□ 0.41
CPSF4-201ENST00000292476 C6orf89Q6UWU4 347 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 OTUD6BQ8N6M0 293 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.62■□□□□ 0.41
CPSF4-201ENST00000292476 IPO4Q8TEX9 1081 aaKnown RBP17.62■□□□□ 0.41
CPSF4-201ENST00000292476 BTBD6Q96KE9 485 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 OSBPL7Q9BZF2 842 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 TMEM161AQ9NX61 479 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 HMGXB4Q9UGU5 601 aa17.62■□□□□ 0.41
CPSF4-201ENST00000292476 SPTLC1O15269 473 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 RIPK2O43353 540 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 PROSCO94903 275 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 CSF2RAP15509 400 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 SEC24CP53992 1094 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 MAMLD1Q13495 774 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 ZNF268Q14587 947 aaPredicted RBP17.61■□□□□ 0.41
CPSF4-201ENST00000292476 UPP1Q16831 310 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 DENND1BQ6P3S1 775 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 DNAJC24Q6P3W2 148 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 DSTYKQ6XUX3 929 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 TMEM130Q8N3G9 435 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 FEZF2Q8TBJ5 459 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 SCLYQ96I15 445 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 RABEP2Q9H5N1 569 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 RNF19AQ9NV58 838 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 MIOSQ9NXC5 875 aa17.61■□□□□ 0.41
CPSF4-201ENST00000292476 DSEQ9UL01 958 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms