RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CYP4F8P98187 520 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 BST2Q10589 180 aaKnown RBP28.42■■■□□ 2.14
SSU72-201ENST00000291386 HTR4Q13639 388 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 NR1I3Q14994 352 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 MRPS31Q92665 395 aaKnown RBP28.42■■■□□ 2.14
SSU72-201ENST00000291386 ZSWIM3Q96MP5 696 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 ASB16Q96NS5 453 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 NAP1L5Q96NT1 182 aaPredicted RBP28.42■■■□□ 2.14
SSU72-201ENST00000291386 SLITRK1Q96PX8 696 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 FBXO44Q9H4M3 255 aa28.42■■■□□ 2.14
SSU72-201ENST00000291386 FAM207AQ9NSI2 230 aaPredicted RBP28.42■■■□□ 2.14
SSU72-201ENST00000291386 XPO1O14980 1071 aaKnown RBP28.41■■■□□ 2.14
SSU72-201ENST00000291386 SERPINC1P01008 464 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 SETSIPP0DME0 302 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 GNA15P30679 374 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 USP8P40818 1118 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 FANCCQ00597 558 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 TAF10Q12962 218 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 RAPGEF1Q13905 1077 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 STXBP5Q5T5C0 1151 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 GPR158Q5T848 1215 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 PDZD8Q8NEN9 1154 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 SCAMP5Q8TAC9 235 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 ZNF606Q8WXB4 792 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 TRPM5Q9NZQ8 1165 aa28.41■■■□□ 2.14
SSU72-201ENST00000291386 A0A1W2PQC6 194 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 EPHB6O15197 1021 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 MED7O43513 233 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 PFKLP17858 780 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 CLCN1P35523 988 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 PLA2G4AP47712 749 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 KIF11P52732 1056 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 PDE4CQ08493 712 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 RAB41Q5JT25 222 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 FAM78AQ5JUQ0 283 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 PARM1Q6UWI2 310 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 GPRIN1Q7Z2K8 1008 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 PIGZQ86VD9 579 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 MON1AQ86VX9 555 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 NEK11Q8NG66 645 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 ZSCAN18Q8TBC5 510 aaPredicted RBP28.4■■■□□ 2.14
SSU72-201ENST00000291386 FGF14Q92915 247 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 SMARCD2Q92925 531 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 SLC46A2Q9BY10 475 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 USP3Q9Y6I4 520 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 A0A0C4DFX4 3053 aa28.4■■■□□ 2.14
SSU72-201ENST00000291386 BDP1A6H8Y1 2624 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 ZNF840PA6NDX5 716 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 F8VZ95 297 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 TNFRSF10AO00220 468 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 CYP26A1O43174 497 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 ECI2O75521 394 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 CALCAP01258 141 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 ZDHHC11BP0C7U3 371 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 FCARP24071 287 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 JAM2P57087 298 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 BPIFB4P59827 614 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 POLR2FP61218 127 aaKnown RBP28.39■■■□□ 2.14
SSU72-201ENST00000291386 PTK2Q05397 1052 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 PTPN21Q16825 1174 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 SNX30Q5VWJ9 437 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 FBXO32Q969P5 355 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 PCMTD1Q96MG8 357 aaPredicted RBP28.39■■■□□ 2.14
SSU72-201ENST00000291386 SLITRK6Q9H5Y7 841 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 SORCS3Q9UPU3 1222 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 SCML2Q9UQR0 700 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 NUMBLQ9Y6R0 609 aa28.39■■■□□ 2.14
SSU72-201ENST00000291386 TXNDC8Q6A555 127 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 UBA3Q8TBC4 463 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 SLC35F5Q8WV83 523 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 KCTD13Q8WZ19 329 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 E2F7Q96AV8 911 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 ELSPBP1Q96BH3 223 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 ACP6Q9NPH0 428 aa28.38■■■□□ 2.13
SSU72-201ENST00000291386 M0QYV0 167 aa28.37■■■□□ 2.13
SSU72-201ENST00000291386 ASGR2P07307 311 aa28.37■■■□□ 2.13
SSU72-201ENST00000291386 IFRD2Q12894 506 aaPredicted RBP28.37■■■□□ 2.13
SSU72-201ENST00000291386 CMTM8Q8IZV2 173 aa28.37■■■□□ 2.13
SSU72-201ENST00000291386 ZFP14Q9HCL3 533 aa28.37■■■□□ 2.13
SSU72-201ENST00000291386 MUTYHQ9UIF7 546 aa28.37■■■□□ 2.13
SSU72-201ENST00000291386 MYO16Q9Y6X6 1858 aa28.37■■■□□ 2.13
SSU72-201ENST00000291386 TULP2O00295 520 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 THAP12O43422 761 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 PNMA6AP0CW24 399 aaPredicted RBP28.36■■■□□ 2.13
SSU72-201ENST00000291386 GPD2P43304 727 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 PDE6CP51160 858 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 UBASH3AP57075 661 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 TDGQ13569 410 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 TANGO2Q6ICL3 276 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 CCDC186Q7Z3E2 898 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 ARID3BQ8IVW6 561 aaPredicted RBP28.36■■■□□ 2.13
SSU72-201ENST00000291386 SLC44A3Q8N4M1 653 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 MAB21L3Q8N8X9 362 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 RSAD2Q8WXG1 361 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 SECISBP2LQ93073 1101 aaKnown RBP28.36■■■□□ 2.13
SSU72-201ENST00000291386 OBP2AQ9NY56 170 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 PCDHGC3Q9UN70 934 aa28.36■■■□□ 2.13
SSU72-201ENST00000291386 RPL34P49207 117 aaKnown RBP28.35■■■□□ 2.13
SSU72-201ENST00000291386 SLC47A2Q86VL8 602 aa28.35■■■□□ 2.13
SSU72-201ENST00000291386 KHSRPQ92945 711 aaKnown RBP eCLIP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms