RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SMPD4Q9NXE4 827 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 PCDHA7Q9UN72 937 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 PCDHGA5Q9Y5G8 931 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 CPQQ9Y646 472 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 DENND4CQ5VZ89 1909 aa14.94□□□□□ -0.02
TPM1-202ENST00000288398 OBSL1O75147 1896 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 ADH1CP00326 375 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 CASP1P29466 404 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 SEC13P55735 322 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 SLC7A9P82251 487 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 CUL4BQ13620 913 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 NCOA4Q13772 614 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 USP39Q53GS9 565 aaKnown RBP14.93□□□□□ -0.02
TPM1-202ENST00000288398 RESP18Q5W5W9 173 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 SCARA5Q6ZMJ2 495 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 FILIP1Q7Z7B0 1213 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 TTC30AQ86WT1 665 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 KIAA1958Q8N8K9 716 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 ZNF518BQ9C0D4 1074 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 DNAI2Q9GZS0 605 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 LINC00597Q9H2U6 94 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 DPEP3Q9H4B8 488 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 CFAP97Q9P2B7 532 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 TBC1D14Q9P2M4 693 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 NCOR2Q9Y618 2525 aa14.93□□□□□ -0.02
TPM1-202ENST00000288398 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
TPM1-202ENST00000288398 ALDH1A2O94788 518 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 KIF20AO95235 890 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 SLFN14P0C7P3 912 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 ZNF806P0C7X5 589 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 MPLP40238 635 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 CCDC6Q16204 474 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 C2orf27AQ580R0 203 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 BTBD8Q5XKL5 378 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 NAIF1Q69YI7 327 aaPredicted RBP14.92□□□□□ -0.02
TPM1-202ENST00000288398 OVCA2Q8WZ82 227 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 SMARCD1Q96GM5 515 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 B3GNT5Q9BYG0 378 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 SMYD3Q9H7B4 428 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 DMAP1Q9NPF5 467 aaPredicted RBP14.92□□□□□ -0.02
TPM1-202ENST00000288398 VPS45Q9NRW7 570 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 CIZ1Q9ULV3 898 aaPredicted RBP14.92□□□□□ -0.02
TPM1-202ENST00000288398 FRMD4BQ9Y2L6 1034 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 SH3BP1Q9Y3L3 701 aa14.92□□□□□ -0.02
TPM1-202ENST00000288398 CLDN5O00501 218 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 GDF9O60383 454 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 APODP05090 189 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 HOXC13P31276 330 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 RAP1GAPP47736 663 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 CASP4P49662 377 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 CREB5Q02930 508 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 EHHADHQ08426 723 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 SF3A2Q15428 464 aaKnown RBP14.91□□□□□ -0.02
TPM1-202ENST00000288398 PREPLQ4J6C6 727 aaPredicted RBP14.91□□□□□ -0.02
TPM1-202ENST00000288398 HECTD3Q5T447 861 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 NUDT18Q6ZVK8 323 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 GRAMD1CQ8IYS0 662 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 SPRYD3Q8NCJ5 442 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 ZNF516Q92618 1163 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 ZC3H10Q96K80 434 aaKnown RBP14.91□□□□□ -0.02
TPM1-202ENST00000288398 PNKPQ96T60 521 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 IMPG2Q9BZV3 1241 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 EBF1Q9UH73 591 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 USP25Q9UHP3 1055 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 SERTAD1Q9UHV2 236 aa14.91□□□□□ -0.02
TPM1-202ENST00000288398 LRRIQ3A6PVS8 624 aaPredicted RBP14.9□□□□□ -0.02
TPM1-202ENST00000288398 CALUO43852 315 aaPredicted RBP14.9□□□□□ -0.02
TPM1-202ENST00000288398 OAS1P00973 400 aaKnown RBP14.9□□□□□ -0.02
TPM1-202ENST00000288398 CYP17A1P05093 508 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 ADH5P11766 374 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
TPM1-202ENST00000288398 DHCR24Q15392 516 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 SGSM1Q2NKQ1 1148 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 PLK5Q496M5 336 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 CEP135Q66GS9 1140 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 ANO7Q6IWH7 933 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 FAM35AQ86V20 835 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 CCDC150Q8NCX0 1101 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 PARD3BQ8TEW8 1205 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 RNF38Q9H0F5 515 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 XYLT2Q9H1B5 865 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 KRT82Q9NSB4 513 aa14.9□□□□□ -0.02
TPM1-202ENST00000288398 POLR3BQ9NW08 1133 aaPredicted RBP14.9□□□□□ -0.02
TPM1-202ENST00000288398 BCCIPQ9P287 314 aaKnown RBP eCLIP14.9□□□□□ -0.02
TPM1-202ENST00000288398 RALGAPA1Q6GYQ0 2036 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 E2F8A0AVK6 867 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 SCAMP3O14828 347 aaKnown RBP14.89□□□□□ -0.03
TPM1-202ENST00000288398 AP1G2O75843 785 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 OLFM2O95897 454 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 NR3C1P04150 777 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 RPN1P04843 607 aaKnown RBP14.89□□□□□ -0.03
TPM1-202ENST00000288398 MYL1P05976 194 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 ADRB1P08588 477 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 OPRD1P41143 372 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 EIF2DP41214 584 aaKnown RBP14.89□□□□□ -0.03
TPM1-202ENST00000288398 PIK3CAP42336 1068 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 LIMK1P53667 647 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 SLC5A3P53794 718 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 CACNA2D1P54289 1103 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 CDH8P55286 799 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms