RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 PRAMEF18Q5VWM3 479 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 GRAMD4Q6IC98 578 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 TMEM53Q6P2H8 277 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 C1orf228Q6PIY5 440 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 TRABD2AQ86V40 505 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 LRRC6Q86X45 466 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 CCDC60Q8IWA6 550 aaPredicted RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 MCOLN2Q8IZK6 566 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ZNF280CQ8ND82 737 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 DENND1AQ8TEH3 1009 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 MAML1Q92585 1016 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ZNF516Q92618 1163 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 TMEM143Q96AN5 459 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 CDHR1Q96JP9 859 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 SRPK1Q96SB4 655 aaKnown RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 KIAA1586Q9HCI6 787 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 CYLDQ9NQC7 956 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 CHST7Q9NS84 486 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 AGO2Q9UKV8 859 aaKnown RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 EFR3BQ9Y2G0 817 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 LRRIQ4A6NIV6 560 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ATP9BO43861 1147 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ZC3H11AO75152 810 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 HLA-DRAP01903 254 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ENO1P06733 434 aaKnown RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 RRM1P23921 792 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 GJC1P36383 396 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ADCY8P40145 1251 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 PSMD7P51665 324 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 KDSRQ06136 332 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 NR1H3Q13133 447 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 DCTN2Q13561 401 aaKnown RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 MMEL1Q495T6 779 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 NADK2Q4G0N4 442 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 LIN9Q5TKA1 542 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 SPOPLQ6IQ16 392 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 CCDC62Q6P9F0 684 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 MICALL2Q8IY33 904 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 METTL25Q8N6Q8 603 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 HIPK4Q8NE63 616 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 DEPTORQ8TB45 409 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 ERLEC1Q96DZ1 483 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 TRIM11Q96F44 468 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 WRNIP1Q96S55 665 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 KLF6Q99612 283 aaPredicted RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 KLHL4Q9C0H6 718 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 XPNPEP1Q9NQW7 623 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 PPP1R1BQ9UD71 204 aaPredicted RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 FZD1Q9UP38 647 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 R3HDM2Q9Y2K5 976 aaKnown RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 PCDHB4Q9Y5E5 795 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 PCDHB2Q9Y5E7 798 aa7.95□□□□□ -1.14
TRIM6-201ENST00000278302 GOLGB1Q14789 3259 aaKnown RBP7.95□□□□□ -1.14
TRIM6-201ENST00000278302 SMIM31A0A1B0GVY4 71 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 TMEM247A6NEH6 219 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 K7ERI5 159 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 FSCN2O14926 492 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 LSM1O15116 133 aaKnown RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 ADCY3O60266 1144 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 GRIN3BO60391 1043 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 DNAJC6O75061 913 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 TROVE2P10155 538 aaKnown RBP eCLIP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 DSG3P32926 999 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 MTTPP55157 894 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 SH3BGRP55822 239 aaPredicted RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 AP2B1P63010 937 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 MSLNQ13421 630 aaPredicted RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 SIX1Q15475 284 aaPredicted RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 XKR3Q5GH77 459 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 ZNF362Q5T0B9 420 aaPredicted RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 FBXL19Q6PCT2 694 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 RHBDF2Q6PJF5 856 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 PASD1Q8IV76 773 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 ZFP28Q8NHY6 868 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 PSPC1Q8WXF1 523 aaKnown RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 KCNN1Q92952 543 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 HEMGNQ9BXL5 484 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 LRRC19Q9H756 370 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 LIN28AQ9H9Z2 209 aaKnown RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 UBAP1Q9NZ09 502 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 LGALS13Q9UHV8 139 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 ANAPC5Q9UJX4 755 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 USTQ9Y2C2 406 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 BUD23O43709 281 aaKnown RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 STBD1O95210 358 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 TFAP2AP05549 437 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 TFPTP0C1Z6 253 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 UNGP13051 313 aaPredicted RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 VCLP18206 1134 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 PEX2P28328 305 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 NLRP11P59045 1033 aaKnown RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 EMC2Q15006 297 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 PDK3Q15120 406 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 LLGL2Q6P1M3 1020 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 RNF111Q6ZNA4 994 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 RGS9BPQ6ZS82 235 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 TAS1R3Q7RTX0 852 aa7.94□□□□□ -1.14
TRIM6-201ENST00000278302 ALYREFQ86V81 257 aaKnown RBP7.94□□□□□ -1.14
TRIM6-201ENST00000278302 ZNF677Q86XU0 584 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms