RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 RSPH1Q8WYR4 309 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 KCTD13Q8WZ19 329 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 ACSF2Q96CM8 615 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-201ENST00000277657 SUSD3Q96L08 255 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 UBXN6Q9BZV1 441 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 ELAC1Q9H777 363 aaKnown RBP23.15■■□□□ 1.3
CCDC7-201ENST00000277657 WBP1LQ9NX94 342 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 DSEQ9UL01 958 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 USP18Q9UMW8 372 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 MYBPHLA2RUH7 354 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 LRRD1A4D1F6 860 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 B4GALT3O60512 393 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 FAM153BP0C7A2 387 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 CCNG2Q16589 344 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 TAZQ16635 292 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 FAM153CQ494X1 144 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 PAN2Q504Q3 1202 aaKnown RBP23.15■■□□□ 1.3
CCDC7-201ENST00000277657 SH3PXD2AQ5TCZ1 1133 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 DBF4BQ8NFT6 615 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 CMASQ8NFW8 434 aaPredicted RBP23.15■■□□□ 1.3
CCDC7-201ENST00000277657 MYCBPAPQ8TBZ2 947 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 CLEC4CQ8WTT0 213 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 ZWILCHQ9H900 591 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 FAM153AQ9UHL3 310 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 EFR3BQ9Y2G0 817 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 ENPP3O14638 875 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 BEST1O76090 585 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 DDHD2O94830 711 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 TJP3O95049 919 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 ITGB1P05556 798 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 KRT10P13645 584 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 LCP1P13796 627 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 KCNJ1P48048 391 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 ADCY2Q08462 1091 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 KCTD19Q17RG1 926 aaPredicted RBP23.14■■□□□ 1.29
CCDC7-201ENST00000277657 C15orf59Q2T9L4 293 aaPredicted RBP23.14■■□□□ 1.29
CCDC7-201ENST00000277657 SMTNL2Q2TAL5 461 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 ODF2Q5BJF6 829 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 CYP4V2Q6ZWL3 525 aaPredicted RBP23.14■■□□□ 1.29
CCDC7-201ENST00000277657 METTL23Q86XA0 190 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 ZNF280BQ86YH2 543 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 URGCPQ8TCY9 931 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 ATG4AQ8WYN0 398 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 PCED1BQ96HM7 432 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 CFAP57Q96MR6 1250 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 ACBD6Q9BR61 282 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 KANSL3Q9P2N6 904 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 HPCAL4Q9UM19 191 aa23.14■■□□□ 1.29
CCDC7-201ENST00000277657 FAM200BP0CF97 657 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 HLTFQ14527 1009 aaKnown RBP eCLIP23.13■■□□□ 1.29
CCDC7-201ENST00000277657 KCNT1Q5JUK3 1230 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 ANKRD33Q7Z3H0 272 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 FAM35AQ86V20 835 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 PEBP4Q96S96 227 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 MED10Q9BTT4 135 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 C11orf84Q9BUA3 381 aaPredicted RBP23.13■■□□□ 1.29
CCDC7-201ENST00000277657 KRT82Q9NSB4 513 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 PCSK1NQ9UHG2 260 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 ARHGEF37A1IGU5 675 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 TMEM189-UBE2V1I3L0A0 370 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 PQBP1O60828 265 aaKnown RBP23.13■■□□□ 1.29
CCDC7-201ENST00000277657 KDELR1P24390 212 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 SDC4P31431 198 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 PTPN9P43378 593 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 MNX1P50219 401 aaPredicted RBP23.13■■□□□ 1.29
CCDC7-201ENST00000277657 FAM171BQ6P995 826 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 COLGALT2Q8IYK4 626 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 MREGQ8N565 214 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 HASPINQ8TF76 798 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 SEPT8Q92599 483 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 NEUROG2Q9H2A3 272 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 DPH5Q9H2P9 285 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 TBC1D13Q9NVG8 400 aa23.13■■□□□ 1.29
CCDC7-201ENST00000277657 F8W810 466 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 ECEL1O95672 775 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 TYMPP19971 482 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 ADCY1Q08828 1119 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 RAB6CQ53S08 254 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 APBB2Q92870 758 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 PKMYT1Q99640 499 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 NCAPGQ9BPX3 1015 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 RAB6CQ9H0N0 254 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 TANC1Q9C0D5 1861 aa23.12■■□□□ 1.29
CCDC7-201ENST00000277657 ADIGQ0VDE8 80 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 SNX1Q13596 522 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 EFHC1Q5JVL4 640 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 KAZNQ674X7 775 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 SYDE1Q6ZW31 735 aaPredicted RBP23.11■■□□□ 1.29
CCDC7-201ENST00000277657 ATL2Q8NHH9 583 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 CENPIQ92674 756 aaPredicted RBP23.11■■□□□ 1.29
CCDC7-201ENST00000277657 SMOQ99835 787 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 TRIM31Q9BZY9 425 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 FEZ2Q9UHY8 353 aaPredicted RBP23.11■■□□□ 1.29
CCDC7-201ENST00000277657 MAP3K7CLP57077 242 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 ATP11AP98196 1134 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 INTS6LQ5JSJ4 861 aaKnown RBP23.11■■□□□ 1.29
CCDC7-201ENST00000277657 DRICH1Q6PGQ1 229 aaPredicted RBP23.11■■□□□ 1.29
CCDC7-201ENST00000277657 SLC39A5Q6ZMH5 540 aa23.11■■□□□ 1.29
CCDC7-201ENST00000277657 GRK7Q8WTQ7 553 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms