RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CHSY1Q86X52 802 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 NIPA2Q8N8Q9 360 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 SPATA18Q8TC71 538 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 SLC44A1Q8WWI5 657 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 SRPK1Q96SB4 655 aaKnown RBP28.7■■■□□ 2.19
CBX4-201ENST00000269397 TCHPQ9BT92 498 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 SCOCQ9UIL1 159 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 STRIP2Q9ULQ0 834 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 RXRBP28702 533 aa28.7■■■□□ 2.18
CBX4-201ENST00000269397 TGFB2P61812 414 aa28.7■■■□□ 2.18
CBX4-201ENST00000269397 HSF5Q4G112 596 aaPredicted RBP28.7■■■□□ 2.18
CBX4-201ENST00000269397 PPM1NQ8N819 430 aa28.7■■■□□ 2.18
CBX4-201ENST00000269397 DDX50Q9BQ39 737 aaKnown RBP28.7■■■□□ 2.18
CBX4-201ENST00000269397 IQCGQ9H095 443 aaKnown RBP28.7■■■□□ 2.18
CBX4-201ENST00000269397 MAP3K20Q9NYL2 800 aaKnown RBP28.7■■■□□ 2.18
CBX4-201ENST00000269397 TRIM49D1C9J1S8 452 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 ONECUT3O60422 494 aaPredicted RBP28.69■■■□□ 2.18
CBX4-201ENST00000269397 SLC13A1Q9BZW2 595 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 PPARGC1AQ9UBK2 798 aaKnown RBP28.69■■■□□ 2.18
CBX4-201ENST00000269397 CYB561D2O14569 222 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 TGDSO95455 350 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 LDHAP00338 332 aaKnown RBP28.69■■■□□ 2.18
CBX4-201ENST00000269397 KRT72Q14CN4 511 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 FOXB2Q5VYV0 432 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 CES4AQ5XG92 561 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 POLNQ7Z5Q5 900 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 TMEM130Q8N3G9 435 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 PPFIBP2Q8ND30 876 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 CNTN3Q9P232 1028 aa28.69■■■□□ 2.18
CBX4-201ENST00000269397 COPEO14579 308 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 DKC1O60832 514 aaKnown RBP eCLIP28.68■■■□□ 2.18
CBX4-201ENST00000269397 AP1G2O75843 785 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 UBTFL6P0CB48 400 aaPredicted RBP28.68■■■□□ 2.18
CBX4-201ENST00000269397 PSMC1P62191 440 aaKnown RBP28.68■■■□□ 2.18
CBX4-201ENST00000269397 SLC18A2Q05940 514 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 AP1B1Q10567 949 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 XKR3Q5GH77 459 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 ARID3BQ8IVW6 561 aaPredicted RBP28.68■■■□□ 2.18
CBX4-201ENST00000269397 TTC13Q8NBP0 860 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 LRRN4Q8WUT4 740 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 LPAR1Q92633 364 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 ADGRA2Q96PE1 1338 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 MAP3K7O43318 606 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 SP2Q02086 613 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 FAXCQ5TGI0 409 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 PORCNQ9H237 461 aa28.68■■■□□ 2.18
CBX4-201ENST00000269397 CXorf49A8MYA2 514 aaPredicted RBP28.67■■■□□ 2.18
CBX4-201ENST00000269397 KRT7P08729 469 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 RAP1GAPP47736 663 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 CACNA2D1P54289 1103 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 HADHQ16836 314 aaKnown RBP28.67■■■□□ 2.18
CBX4-201ENST00000269397 DARS2Q6PI48 645 aaKnown RBP28.67■■■□□ 2.18
CBX4-201ENST00000269397 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.67■■■□□ 2.181e-10■■■■□ 20.7
CBX4-201ENST00000269397 RBM15BQ8NDT2 890 aaKnown RBP28.67■■■□□ 2.18
CBX4-201ENST00000269397 NXF1Q9UBU9 619 aaKnown RBP28.67■■■□□ 2.18
CBX4-201ENST00000269397 VWA5AO00534 786 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 MCF2LO15068 1137 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 MAP3K6O95382 1288 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 TAP1Q03518 808 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 BIRC2Q13490 618 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 BMPR2Q13873 1038 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 GMLQ99445 158 aa28.67■■■□□ 2.18
CBX4-201ENST00000269397 TMPRSS15P98073 1019 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 TFAMQ00059 246 aaKnown RBP28.66■■■□□ 2.18
CBX4-201ENST00000269397 BST1Q10588 318 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 CCNJLQ8IV13 435 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 ACAP3Q96P50 834 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 NIF3L1Q9GZT8 377 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 TEX264Q9Y6I9 313 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 UGT1A9O60656 530 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 POLE2P56282 527 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 RAB6CQ53S08 254 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 AP1ARQ63HQ0 302 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 SLC25A41Q8N5S1 370 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 TRIM56Q9BRZ2 755 aaKnown RBP28.66■■■□□ 2.18
CBX4-201ENST00000269397 RAB6CQ9H0N0 254 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 UGT1A7Q9HAW7 530 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 UGT1A10Q9HAW8 530 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 UGT1A8Q9HAW9 530 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 EIF4BP23588 611 aaKnown RBP28.66■■■□□ 2.18
CBX4-201ENST00000269397 NAMPTP43490 491 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 CPXM1Q96SM3 734 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 PGAP2Q9UHJ9 254 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 POLIQ9UNA4 740 aa28.66■■■□□ 2.18
CBX4-201ENST00000269397 MIPP30301 263 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 SH3PXD2AQ5TCZ1 1133 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 SNRNP48Q6IEG0 339 aaKnown RBP28.65■■■□□ 2.18
CBX4-201ENST00000269397 SHKBP1Q8TBC3 707 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 CCDC110Q8TBZ0 833 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 FAF2Q96CS3 445 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 ZNF184Q99676 751 aaPredicted RBP28.65■■■□□ 2.18
CBX4-201ENST00000269397 THTPAQ9BU02 230 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 PHACTR1Q9C0D0 580 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 MMADHCQ9H3L0 296 aaPredicted RBP28.65■■■□□ 2.18
CBX4-201ENST00000269397 APOC4-APOC2K7ER74 178 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 APOC2P02655 101 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 ZCCHC18P0CG32 403 aa28.65■■■□□ 2.18
CBX4-201ENST00000269397 ZNF277Q9NRM2 450 aaPredicted RBP28.65■■■□□ 2.18
CBX4-201ENST00000269397 SMAPO00193 183 aa28.64■■■□□ 2.18
CBX4-201ENST00000269397 PIGRP01833 764 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms