RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 AGTP01019 485 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 HIST1H2AGP0C0S8 130 aaPredicted RBP14.25□□□□□ -0.13
NPC1-201ENST00000269228 HIST1H2ADP20671 130 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 KLRC2P26717 231 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 ECM1Q16610 540 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 SMARCD1Q96GM5 515 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 HIST1H2AHQ96KK5 128 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 HIST1H2AJQ99878 128 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 H2AFJQ9BTM1 129 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 CDT1Q9H211 546 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 Q9H521 79 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 TLR8Q9NR97 1041 aaKnown RBP14.25□□□□□ -0.13
NPC1-201ENST00000269228 ZFP69BQ9UJL9 534 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 ASTN1O14525 1302 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 UMODL1Q5DID0 1318 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 ZNF197O14709 1029 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 SNCBQ16143 134 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 ZRANB3Q5FWF4 1079 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 DLK2Q6UY11 383 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 STAMBPL1Q96FJ0 436 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 NFICP08651 508 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 SPRP35270 261 aaPredicted RBP14.25□□□□□ -0.13
NPC1-201ENST00000269228 SERPINB9P50453 376 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 GUCY1A3Q02108 690 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 DUSP28Q4G0W2 176 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 SLC39A12Q504Y0 691 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.25□□□□□ -0.13
NPC1-201ENST00000269228 CALML6Q8TD86 181 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 BLOC1S5Q8TDH9 187 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 TSPAN17Q96FV3 270 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 DNAJC18Q9H819 358 aa14.25□□□□□ -0.13
NPC1-201ENST00000269228 A0A0A6YYK5 440 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 ANP32DO95626 131 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 CCDC130P13994 396 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 YWHAZP63104 245 aaKnown RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 MORF4L2Q15014 288 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 POLD3Q15054 466 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 PTRHD1Q6GMV3 140 aaKnown RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 BTBD7Q9P203 1132 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 SNCAIPQ9Y6H5 919 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 STX7O15400 261 aaKnown RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 B4GALT5O43286 388 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 OXCT1P55809 520 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 EXD1Q8NHP7 514 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 TNFRSF25Q93038 417 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 XAB2Q9HCS7 855 aaKnown RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 DMAP1Q9NPF5 467 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 SMPD4Q9NXE4 827 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 VPS28Q9UK41 221 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 TRIM33Q9UPN9 1127 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 SPAG6O75602 509 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 HAUS5O94927 633 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 PAEPP09466 180 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 KCNA2P16389 499 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 MAP4P27816 1152 aaKnown RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 FDFT1P37268 417 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 TNFSF9P41273 254 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 MTMR8Q96EF0 704 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 ACO2Q99798 780 aaKnown RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 HAUS8Q9BT25 410 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 TASP1Q9H6P5 420 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 SMYD3Q9H7B4 428 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 VAV3Q9UKW4 847 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 DLG5Q8TDM6 1919 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 DDX3XO00571 662 aaKnown RBP eCLIP14.24□□□□□ -0.132e-11■■■□□ 15.3
NPC1-201ENST00000269228 OPHN1O60890 802 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 ZBTB48P10074 688 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 BDNFP23560 247 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 WEE1P30291 646 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 ZNF268Q14587 947 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 NFIL3Q16649 462 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 LINC00523Q86TU6 105 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 GBP7Q8N8V2 638 aaPredicted RBP14.24□□□□□ -0.13
NPC1-201ENST00000269228 ADAM32Q8TC27 787 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 FBXO44Q9H4M3 255 aa14.24□□□□□ -0.13
NPC1-201ENST00000269228 GYG2O15488 501 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 CCNE2O96020 404 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 SLC8A1P32418 973 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 PTENP60484 403 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 NBPF20Q3BBV1 942 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 ITIH5Q86UX2 942 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 LPPQ93052 612 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 TMEM121Q9BTD3 319 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 RNPEPQ9H4A4 650 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 SLC13A4Q9UKG4 626 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 MAP3K7O43318 606 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 JCHAINP01591 159 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 CD52P31358 61 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 GEMP55040 296 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 MCL1Q07820 350 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 GIPC2Q8TF65 315 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 NCLNQ969V3 563 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 DEFB118Q96PH6 123 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 LRRC37BQ96QE4 947 aa14.23□□□□□ -0.13
NPC1-201ENST00000269228 CHST12Q9NRB3 414 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms