RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 UGT1A9O60656 530 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 FARP2O94887 1054 aaPredicted RBP23.13■■□□□ 1.29
CDR2-201ENST00000268383 CXCL8P10145 99 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 TUBP50607 506 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 RASSF2P50749 326 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 LAMTOR4Q0VGL1 99 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 BLMHQ13867 455 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 ANO7Q6IWH7 933 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 C4orf50Q6ZRC1 276 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 ALYREFQ86V81 257 aaKnown RBP23.13■■□□□ 1.29
CDR2-201ENST00000268383 ZNF518BQ9C0D4 1074 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 UGT1A7Q9HAW7 530 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 UGT1A10Q9HAW8 530 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 UGT1A8Q9HAW9 530 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 USP18Q9UMW8 372 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 SPDYE16A6NNV3 312 aaPredicted RBP23.13■■□□□ 1.29
CDR2-201ENST00000268383 CXorf49A8MYA2 514 aaPredicted RBP23.13■■□□□ 1.29
CDR2-201ENST00000268383 KRT36O76013 467 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 TAP1Q03518 808 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 KPNB1Q14974 876 aaKnown RBP23.13■■□□□ 1.29
CDR2-201ENST00000268383 RASA2Q15283 850 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 NLRP4Q96MN2 994 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.13■■□□□ 1.29
CDR2-201ENST00000268383 ADAMTS5Q9UNA0 930 aa23.13■■□□□ 1.29
CDR2-201ENST00000268383 ABLIM1O14639 778 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 MCF2LO15068 1137 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 ABCD1P33897 745 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 ETV4P43268 484 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 CDH6P55285 790 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 YWHAEP62258 255 aaKnown RBP23.12■■□□□ 1.29
CDR2-201ENST00000268383 TRNP1Q6NT89 227 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 PPM1NQ8N819 430 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 WDR60Q8WVS4 1066 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 CYTH2Q99418 400 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 LRRC42Q9Y546 428 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 IKBKGQ9Y6K9 419 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 TRAFD1O14545 582 aaPredicted RBP23.12■■□□□ 1.29
CDR2-201ENST00000268383 INHBAP08476 426 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 MYL2P10916 166 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 BMPR2Q13873 1038 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 FBXO27Q8NI29 283 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 PTCD3Q96EY7 689 aaKnown RBP23.12■■□□□ 1.29
CDR2-201ENST00000268383 VPS11Q9H270 941 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 KCNG1Q9UIX4 513 aa23.12■■□□□ 1.29
CDR2-201ENST00000268383 APOC4-APOC2K7ER74 178 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 CYB561D2O14569 222 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 TM9SF1O15321 606 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 TOP3BO95985 862 aaKnown RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 APOC2P02655 101 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 ZNF200P98182 395 aaPredicted RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 CES4AQ5XG92 561 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 ZPBP2Q6X784 338 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 FAF2Q96CS3 445 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 SSU72Q9NP77 194 aaKnown RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 MARCOQ9UEW3 520 aaPredicted RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 STRIP2Q9ULQ0 834 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 H7C0C1 242 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 INO80B-WBP1J3KQ70 363 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 GSC2O15499 205 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 TRUB2O95900 331 aaKnown RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 NFICP08651 508 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 KITP10721 976 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 ATP5OP48047 213 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 RCN1Q15293 331 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 ACSBG2Q5FVE4 666 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 FAM102AQ5T9C2 384 aaPredicted RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 DLK2Q6UY11 383 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 CATSPERGQ6ZRH7 1159 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 SLC13A1Q9BZW2 595 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 INO80BQ9C086 356 aaPredicted RBP23.11■■□□□ 1.29
CDR2-201ENST00000268383 RAB6BQ9NRW1 208 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 NRBP2Q9NSY0 501 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 SIX4Q9UIU6 781 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 HEY1Q9Y5J3 304 aa23.11■■□□□ 1.29
CDR2-201ENST00000268383 TRIM49D1C9J1S8 452 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 GYG2O15488 501 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 MAFO75444 373 aaPredicted RBP23.1■■□□□ 1.29
CDR2-201ENST00000268383 DLDP09622 509 aaKnown RBP23.1■■□□□ 1.29
CDR2-201ENST00000268383 YY1P25490 414 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 POLR2BP30876 1174 aaKnown RBP23.1■■□□□ 1.29
CDR2-201ENST00000268383 GCKP35557 465 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 NEK3P51956 506 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 TTC13Q8NBP0 860 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 JDP2Q8WYK2 163 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 BTBD10Q9BSF8 475 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 YIPF3Q9GZM5 350 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 ELOVL4Q9GZR5 314 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 LNPEPQ9UIQ6 1025 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 IGKV6D-21A0A0A0MT36 114 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 M0QYV0 167 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 ROR1Q01973 937 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 PRKD1Q15139 912 aaPredicted RBP23.1■■□□□ 1.29
CDR2-201ENST00000268383 WASHC2DQ5SRD0 308 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 NAIF1Q69YI7 327 aaPredicted RBP23.1■■□□□ 1.29
CDR2-201ENST00000268383 SH2D5Q6ZV89 423 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 ENDOVQ8N8Q3 282 aaKnown RBP23.1■■□□□ 1.29
CDR2-201ENST00000268383 SLC4A11Q8NBS3 891 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 NRG4Q8WWG1 115 aa23.1■■□□□ 1.29
CDR2-201ENST00000268383 SLC44A1Q8WWI5 657 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms