RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 GFM2Q969S9 779 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 NDUFA13Q9P0J0 144 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 FIS1Q9Y3D6 152 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 PCDHA3Q9Y5H8 950 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 A8MUI8 341 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 WEE2P0C1S8 567 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 PECAM1P16284 738 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 SKIV2L2P42285 1042 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 CPT1AP50416 773 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 PSMC1P62191 440 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 RGMBQ6NW40 437 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 RASGEF1CQ8N431 466 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 KCNK16Q96T55 309 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 SLC24A2Q9UI40 661 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 C5orf60A6NFR6 353 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 NOL4O94818 638 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 CCNE2O96020 404 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 MYL3P08590 195 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 SNRPAP09012 282 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 ZNF268Q14587 947 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 RASA2Q15283 850 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 TMCO4Q5TGY1 634 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 GRAMD4Q6IC98 578 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 CATSPER4Q7RTX7 472 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 SESTD1Q86VW0 696 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 LRRC43Q8N309 656 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 CATSPER1Q8NEC5 780 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 FAM193BQ96PV7 902 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 TMEM120AQ9BXJ8 343 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 NACA2Q9H009 215 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 TAS2R14Q9NYV8 317 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 STARD13Q9Y3M8 1113 aa12.01□□□□□ -0.49
CLSTN3-201ENST00000266546 LOC100653049A0A140TA62 436 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TMEM150BA6NC51 233 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 BTBD19C9JJ37 291 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 KPNA6O60684 536 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ZC3H11AO75152 810 aaKnown RBP eCLIP12□□□□□ -0.492e-6■■■■■ 37.4
CLSTN3-201ENST00000266546 KRT34O76011 436 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 KLHL2O95198 593 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ATP6V1B1P15313 513 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 RRM1P23921 792 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 LY6KQ17RY6 165 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 EFCAB12Q6NXP0 572 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 SLC47A2Q86VL8 602 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 CBWD2Q8IUF1 395 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PPIL6Q8IXY8 311 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 LNX1Q8TBB1 728 aaPredicted RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 ALG3Q92685 438 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PI4K2AQ9BTU6 479 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 SAR1AQ9NR31 198 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 IL1RAPL1Q9NZN1 696 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ZC3H7BQ9UGR2 993 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 DHX15O43143 795 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 RPLP2P05387 115 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 GPC3P51654 580 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 BCAR1P56945 870 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 STX1BP61266 288 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 BNIP1Q12981 228 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PKN2Q16513 984 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 DUOXA2Q1HG44 320 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TRMT5Q32P41 509 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 ACAD11Q709F0 780 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PDZD4Q76G19 769 aaPredicted RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 MCEEQ96PE7 176 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PORCNQ9H237 461 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 CHST7Q9NS84 486 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PCMTD2Q9NV79 361 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ASNSD1Q9NWL6 643 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 RBPJLQ9UBG7 517 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ZBBXA8MT70 800 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 KPNA7A9QM74 516 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TRIM49D1C9J1S8 452 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 LIN7AO14910 233 aaPredicted RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 CST8O60676 142 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TYK2P29597 1187 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 MARCKSL1P49006 195 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 NCKAP1LP55160 1127 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TAP1Q03518 808 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ZBTB17Q13105 803 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 CHI3L2Q15782 390 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 SLC45A4Q5BKX6 768 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ZPBP2Q6X784 338 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 POP1Q99575 1024 aaKnown RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 DCLK3Q9C098 648 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 TOPORSQ9NS56 1045 aaPredicted RBP12□□□□□ -0.49
CLSTN3-201ENST00000266546 SYNJ2BP-COX16A0A087WUM0 186 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 PSTPIP1O43586 416 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 APOEP02649 317 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 APRTP07741 180 aa12□□□□□ -0.49
CLSTN3-201ENST00000266546 ARL4AP40617 200 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms