RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SHOC2Q9UQ13 582 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 SNCAIPQ9Y6H5 919 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 KCNN4O15554 427 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 SORBS2O94875 1100 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 ITGAVP06756 1048 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 TBXAS1P24557 533 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 RASSF2P50749 326 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 BLMHQ13867 455 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 DPYSL3Q14195 570 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 C16orf46Q6P387 395 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 TRMT10BQ6PF06 316 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 RIBC1Q8N443 379 aaPredicted RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 TTC1Q99614 292 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 NIF3L1Q9GZT8 377 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 SDCBP2Q9H190 292 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 NGRNQ9NPE2 291 aaKnown RBP17.55■□□□□ 0.4
SQLE-201ENST00000265896 PCMTD2Q9NV79 361 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
SQLE-201ENST00000265896 M0QYV0 167 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 GSC2O15499 205 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 ZCCHC18P0CG32 403 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 PHBP35232 272 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 ATXN1P54253 815 aaKnown RBP17.54■□□□□ 0.4
SQLE-201ENST00000265896 MXRA7P84157 204 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 TREML1Q86YW5 311 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 TMEM174Q8WUU8 243 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 GPRASP2Q96D09 838 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 C20orf27Q9GZN8 174 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 ACSS3Q9H6R3 686 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 TCRBV5S1A1TA0A578 114 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 B2RBV5 119 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 C2CD2LO14523 706 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 FCHO1O14526 889 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 PHKA2P46019 1235 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 TMPRSS15P98073 1019 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 CCDC15Q0P6D6 951 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 POU5F2Q8N7G0 328 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 SCG3Q8WXD2 468 aaKnown RBP17.54■□□□□ 0.4
SQLE-201ENST00000265896 RILPQ96NA2 401 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 C17orf75Q9HAS0 396 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 CYLDQ9NQC7 956 aa17.54■□□□□ 0.4
SQLE-201ENST00000265896 CLDN10P78369 228 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 UBAP2LQ14157 1087 aaKnown RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 PIGHQ14442 188 aaPredicted RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 ADGRD1Q6QNK2 874 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 RELL1Q8IUW5 271 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 MPP5Q8N3R9 675 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.53■□□□□ 0.4
SQLE-201ENST00000265896 MZB1Q8WU39 189 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 NKD2Q969F2 451 aaPredicted RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 PCYT2Q99447 389 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 HACL1Q9UJ83 578 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 GINS2Q9Y248 185 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 MCF2LO15068 1137 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 TBC1D12O60347 775 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 ZWINTO95229 277 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 NFICP08651 508 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 SKIV2L2P42285 1042 aaKnown RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 CLCN3P51790 818 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 BACE1P56817 501 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 ZNF200P98182 395 aaPredicted RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 DUOXA2Q1HG44 320 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 PARP6Q2NL67 630 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 EML3Q32P44 896 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 SLC45A4Q5BKX6 768 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 AGR3Q8TD06 166 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 VCPIP1Q96JH7 1222 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 SRPK1Q96SB4 655 aaKnown RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 EBF4Q9BQW3 602 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.53■□□□□ 0.42e-7■□□□□ 8.7
SQLE-201ENST00000265896 USP18Q9UMW8 372 aa17.53■□□□□ 0.4
SQLE-201ENST00000265896 MYO18AQ92614 2054 aaKnown RBP17.53■□□□□ 0.4
SQLE-201ENST00000265896 NVLO15381 856 aaKnown RBP17.52■□□□□ 0.4
SQLE-201ENST00000265896 LYPLA1O75608 230 aaPredicted RBP17.52■□□□□ 0.4
SQLE-201ENST00000265896 PGK2P07205 417 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 RBL1P28749 1068 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 ASPAP45381 313 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 SERPINB4P48594 390 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 NEK3P51956 506 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 RASA2Q15283 850 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 OR6B2Q6IFH4 312 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 HACE1Q8IYU2 909 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 MOCOSQ96EN8 888 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 ATXN7L3BQ96GX2 97 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 HEXIM2Q96MH2 286 aaKnown RBP17.52■□□□□ 0.4
SQLE-201ENST00000265896 THTPAQ9BU02 230 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 DHX33Q9H6R0 707 aaKnown RBP17.52■□□□□ 0.4
SQLE-201ENST00000265896 MINDY3Q9H8M7 445 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 SMYD2Q9NRG4 433 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 SLC24A2Q9UI40 661 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 COPEO14579 308 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 SMIM24O75264 130 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 UBA1P22314 1058 aaKnown RBP17.52■□□□□ 0.4
SQLE-201ENST00000265896 TCF7P36402 384 aaPredicted RBP17.52■□□□□ 0.4
SQLE-201ENST00000265896 NAMPTP43490 491 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 ZNF132P52740 706 aa17.52■□□□□ 0.4
SQLE-201ENST00000265896 CHI3L2Q15782 390 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms