RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 LRRC8DQ7L1W4 858 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 PALB2Q86YC2 1186 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 CYP4F11Q9HBI6 524 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 SIX2Q9NPC8 291 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 PCDHB12Q9Y5F1 795 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 NT5C1B-RDH14C9J2C7 533 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 EFEMP1Q12805 493 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 GRIK3Q13003 919 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 DEPDC1BQ8WUY9 529 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 PABPC5Q96DU9 382 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 SCYL1Q96KG9 808 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 BFARQ9NZS9 450 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 PPP1R26Q5T8A7 1209 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 PIGZQ86VD9 579 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ANKMY2Q8IV38 441 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 CABS1Q96KC9 395 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 C9orf72Q96LT7 481 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 FBXL18Q96ME1 805 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ULBP1Q9BZM6 244 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ELOVL4Q9GZR5 314 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 COQ4Q9Y3A0 265 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 PCDHA3Q9Y5H8 950 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 DOCK2Q92608 1830 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 LRG1P02750 347 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 USP17L7P0C7H9 530 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 JAM2P57087 298 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 SESN2P58004 480 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 TUSC3Q13454 348 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 LLGL2Q6P1M3 1020 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ZDHHC17Q8IUH5 632 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 GSDMBQ8TAX9 411 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ISCUQ9H1K1 167 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 PFDN6O15212 129 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 FNTAP49354 379 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 HARS2P49590 506 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 GYS2P54840 703 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 RPL7AP62424 266 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 OTUD4Q01804 1114 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 PDK1Q15118 436 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ATPAF2Q8N5M1 289 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 LSM7Q9UK45 103 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 AJAP1Q9UKB5 411 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 TPX2Q9ULW0 747 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 SCN9AQ15858 1988 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 PTK7Q13308 1070 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 PDK2Q15119 407 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 TTC25Q96NG3 672 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 ENTPD7Q9NQZ7 604 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 SMYD2Q9NRG4 433 aa15.09■□□□□ 0.01
PDLIM2-201ENST00000265810 DDX60LQ5H9U9 1706 aaKnown RBP15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 CFAP69A5D8W1 941 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 CLDN5O00501 218 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 CYP1A2P05177 515 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 NPR3P17342 541 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 NR1D1P20393 614 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 MIPP30301 263 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 ZNF235Q14590 738 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 RNF219Q5W0B1 726 aaPredicted RBP15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 CREG2Q8IUH2 290 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 PLEKHO2Q8TD55 490 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 BCAS4Q8TDM0 211 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 IFT43Q96FT9 208 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 SNX27Q96L92 541 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 NEU2Q9Y3R4 380 aa15.08■□□□□ 0.01
PDLIM2-201ENST00000265810 ZBTB24O43167 697 aaPredicted RBP15.08■□□□□ 0
PDLIM2-201ENST00000265810 ITGA8P53708 1063 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 C15orf59Q2T9L4 293 aaPredicted RBP15.08■□□□□ 0
PDLIM2-201ENST00000265810 CDCA2Q69YH5 1023 aaPredicted RBP15.08■□□□□ 0
PDLIM2-201ENST00000265810 MFSD7Q6UXD7 560 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 PHF13Q86YI8 300 aaPredicted RBP15.08■□□□□ 0
PDLIM2-201ENST00000265810 ANKRD52Q8NB46 1076 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 UROC1Q96N76 676 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 CATSPERBQ9H7T0 1116 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 SLC8A2Q9UPR5 921 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 IGKV6D-21A0A0A0MT36 114 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 VNN1O95497 513 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 GJA9P57773 515 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 TRIM32Q13049 653 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 DCLRE1AQ6PJP8 1040 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 PPM1NQ8N819 430 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 ZNF296Q8WUU4 475 aaPredicted RBP15.08■□□□□ 0
PDLIM2-201ENST00000265810 NUDT5Q9UKK9 219 aa15.08■□□□□ 0
PDLIM2-201ENST00000265810 SIGLEC16A6NMB1 481 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 ATP9BO43861 1147 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 CRCPO75575 148 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 ZNF865P0CJ78 1059 aaPredicted RBP15.07■□□□□ 0
PDLIM2-201ENST00000265810 DAB2IPQ5VWQ8 1189 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 TAS1R3Q7RTX0 852 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 ACTL9Q8TC94 416 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 RUBCNQ92622 972 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 BHMTQ93088 406 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 DDX50Q9BQ39 737 aaKnown RBP15.07■□□□□ 0
PDLIM2-201ENST00000265810 CDHR5Q9HBB8 845 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 CDH9Q9ULB4 789 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 TTLL13PA6NNM8 815 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 GIPC1O14908 333 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 CILPO75339 1184 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 AADACL2Q6P093 401 aa15.07■□□□□ 0
PDLIM2-201ENST00000265810 DBF4BQ8NFT6 615 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms