RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 AGBL3Q8NEM8 1001 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 LXNQ9BS40 222 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 HSPBP1Q9NZL4 362 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 SUN2Q9UH99 717 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 POLIQ9UNA4 740 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 TMED5Q9Y3A6 229 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 A0A088AWK7 358 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 ENTPD3O75355 529 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 BGNP21810 368 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 KLRC2P26717 231 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 PMLP29590 882 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 ADSSP30520 456 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 GPC3P51654 580 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 IRX4P78413 519 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 TLR1Q15399 786 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 GRAMD1BQ3KR37 738 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 PDCD4Q53EL6 469 aaKnown RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 C1orf220Q5T0J3 134 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 KRT39Q6A163 491 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 PPP1R2P3Q6NXS1 205 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 TMEM53Q6P2H8 277 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 OLFML1Q6UWY5 402 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 ARMCX6Q7L4S7 300 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 SIAH1Q8IUQ4 282 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 ARL10Q8N8L6 244 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 KLF6Q99612 283 aaPredicted RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 ZNF577Q9BSK1 485 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 MRPL1Q9BYD6 325 aaKnown RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 EXOC7Q9UPT5 735 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 TMEM98Q9Y2Y6 226 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 SH3PXD2BA1X283 911 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 STIP1P31948 543 aaKnown RBP13.67□□□□□ -0.22
NUP54-201ENST00000264883 FDFT1P37268 417 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 GTF2BQ00403 316 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 TCP10Q12799 353 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 KRT81Q14533 505 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 ABCB5Q2M3G0 1257 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 CENPUQ71F23 418 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 CHSY1Q86X52 802 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 DAW1Q8N136 415 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 PPM1KQ8N3J5 372 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 MTMR14Q8NCE2 650 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 SHKBP1Q8TBC3 707 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
NUP54-201ENST00000264883 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 NT5C1BQ96P26 610 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 C1orf21Q9H246 121 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 ANAPC7Q9UJX3 599 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 EFR3BQ9Y2G0 817 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 DENRO43583 198 aaKnown RBP13.67□□□□□ -0.22
NUP54-201ENST00000264883 PEX1O43933 1283 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 CBFA2T3O75081 653 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 20.6
NUP54-201ENST00000264883 PLCB3Q01970 1234 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 BTKQ06187 659 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 BORAQ6PGQ7 559 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 ZNF410Q86VK4 478 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 SLC47A2Q86VL8 602 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 RIN3Q8TB24 985 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
NUP54-201ENST00000264883 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
NUP54-201ENST00000264883 Q9H521 79 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 TMEM8AQ9HCN3 771 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 BCS1LQ9Y276 419 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 AK5Q9Y6K8 562 aa13.67□□□□□ -0.22
NUP54-201ENST00000264883 MEI4A8MW99 385 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 LPXNO60711 386 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 IL1BP01584 269 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 RALAP11233 206 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 CCNIQ14094 377 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 EFTUD2Q15029 972 aaKnown RBP eCLIP13.66□□□□□ -0.22
NUP54-201ENST00000264883 C3orf62Q6ZUJ4 267 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 ANO5Q75V66 913 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 PLEKHO2Q8TD55 490 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 DDI1Q8WTU0 396 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 ZBED3Q96IU2 234 aaPredicted RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
NUP54-201ENST00000264883 MRPL11Q9Y3B7 192 aaKnown RBP13.66□□□□□ -0.22
NUP54-201ENST00000264883 DTNAQ9Y4J8 743 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms