RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GABRB2P47870 512 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TKTL1P51854 596 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 RNASE9P60153 205 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ERVK-21P61565 698 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 RPL7AP62424 266 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ADIGQ0VDE8 80 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 IFRD2Q12894 506 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 GPM6BQ13491 265 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 NFE2Q16621 373 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF569Q5MCW4 686 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 LIN9Q5TKA1 542 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF662Q6ZS27 426 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TMEM110Q86TL2 294 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 JOSD2Q8TAC2 188 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 SCAMP5Q8TAC9 235 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 MICAL1Q8TDZ2 1067 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ARNTL2Q8WYA1 636 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 VCPIP1Q96JH7 1222 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 NOX5Q96PH1 765 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 WDR24Q96S15 920 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 SEPT5Q99719 369 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 PLVAPQ9BX97 442 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CSNK1G1Q9HCP0 422 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 DMAP1Q9NPF5 467 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 RWDD3Q9Y3V2 267 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 HYOU1Q9Y4L1 999 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 PLXNA3P51805 1871 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ATG2AQ2TAZ0 1938 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 CARNS1A5YM72 827 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 TMEM110-MUSTN1A8MSY1 372 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 FANCGO15287 622 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ABLIM3O94929 683 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC8A3P57103 927 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 MTMR3Q13615 1198 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF268Q14587 947 aaPredicted RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 MGAT5BQ3V5L5 792 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 CFAP221Q4G0U5 840 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 PPP2R2DQ66LE6 453 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 PLEKHA7Q6IQ23 1121 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 DNAJC24Q6P3W2 148 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC35F6Q8N357 371 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 EMC1Q8N766 993 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 TPCN2Q8NHX9 752 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF461Q8TAF7 563 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF564Q8TBZ8 553 aaPredicted RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 IPO4Q8TEX9 1081 aaKnown RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 GIPC2Q8TF65 315 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 GDPD5Q8WTR4 605 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 STK32AQ8WU08 396 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 MCRS1Q96EZ8 462 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 KLHL5Q96PQ7 755 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 C11orf84Q9BUA3 381 aaPredicted RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ULBP1Q9BZM6 244 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 TSGA10Q9BZW7 698 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 RXFP1Q9HBX9 757 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 AVENQ9NQS1 362 aaPredicted RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 TLR9Q9NR96 1032 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 LZTS1Q9Y250 596 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 ZNF638Q14966 1978 aaKnown RBP10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 PATJQ8NI35 1801 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 TRIOBPQ9H2D6 2365 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 GREB1Q4ZG55 1949 aa10.25□□□□□ -0.77
SNRNP40-201ENST00000263694 A0A0A6YYK5 440 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 GRID2IPA4D2P6 1211 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 C2orf71A6NGG8 1288 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 BTNL10A8MVZ5 291 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 H3BNC9 293 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 TNFRSF10BO14763 440 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 BUB1BO60566 1050 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 PALMO75781 387 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 RB1P06400 928 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 USP17L7P0C7H9 530 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 MYBL1P10243 752 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 HAPLN1P10915 354 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 RFC1P35251 1148 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 PGFP49763 221 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 GNG11P61952 73 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 USP46P62068 366 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC6A3Q01959 620 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 OGDHQ02218 1023 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 RAB33AQ14088 237 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 MESDQ14696 234 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 RAB30Q15771 203 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 RAB41Q5JT25 222 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 PPP1R15BQ5SWA1 713 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 FAM102AQ5T9C2 384 aaPredicted RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 DAB2IPQ5VWQ8 1189 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 TRNP1Q6NT89 227 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 OLFML1Q6UWY5 402 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 HFE2Q6ZVN8 426 aa10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 MRPL43Q8N983 215 aaKnown RBP10.24□□□□□ -0.77
SNRNP40-201ENST00000263694 C3orf20Q8ND61 904 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms