RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ELMOD1Q8N336 334 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 ACTRT1Q8TDG2 376 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CASP10Q92851 521 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 C6orf62Q9GZU0 229 aaPredicted RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 GLRA3O75311 464 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 PIAS1O75925 651 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CPSF4O95639 269 aaKnown RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 RPA1P27694 616 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 ELF3P78545 371 aaPredicted RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 LRRC74BQ6ZQY2 392 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CLVS1Q8IUQ0 354 aaPredicted RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 MARK4Q96L34 752 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 GRIP2Q9C0E4 1043 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 EFCAB1Q9HAE3 211 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 WHRNQ9P202 907 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 EIF3DO15371 548 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMG6-201ENST00000263073 SHBGP04278 402 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 RALBP11234 206 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 SSTR1P30872 391 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CSHL1Q14406 222 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 PKN2Q16513 984 aaKnown RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 AGKQ53H12 422 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 SEL1L3Q68CR1 1132 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 HDDC2Q7Z4H3 204 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 DDI1Q8WTU0 396 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CAVIN3Q969G5 261 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 PHF21BQ96EK2 531 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 AP4S1Q9Y587 144 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 STK25O00506 426 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 SPAG6O75602 509 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TPH1P17752 444 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 SEMA3FQ13275 785 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 NRF1Q16656 503 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 DGKDQ16760 1214 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 LUZP2Q86TE4 346 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 REXO4Q9GZR2 422 aaKnown RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 CACNA2D2Q9NY47 1150 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 FAM205AQ6ZU69 1335 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 DPYSL4O14531 572 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 HSPA13P48723 471 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 IL5RAQ01344 420 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CYP51A1Q16850 503 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TFDP3Q5H9I0 405 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TBCELQ5QJ74 424 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 CENPPQ6IPU0 288 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TRIM69Q86WT6 500 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 RTKN2Q8IZC4 609 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
SMG6-201ENST00000263073 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
SMG6-201ENST00000263073 FGFR2P21802 821 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 FAM83EQ2M2I3 478 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 TMC3Q7Z5M5 1100 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 JADE3Q92613 823 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 BTBD10Q9BSF8 475 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 NIF3L1Q9GZT8 377 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 ELP3Q9H9T3 547 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 DCDC2Q9UHG0 476 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 GTF3C4Q9UKN8 822 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 UPP2O95045 317 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 ARHGAP22Q7Z5H3 698 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 ACOT1Q86TX2 421 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 MXRA8Q9BRK3 442 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 CEP152O94986 1710 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 NCAPD2Q15021 1401 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 EME2A4GXA9 379 aaPredicted RBP12.46□□□□□ -0.41
SMG6-201ENST00000263073 O00370 1275 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 AKAP3O75969 853 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 SLC1A6P48664 564 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 SLC34A1Q06495 639 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 STX5Q13190 355 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 OMA1Q96E52 524 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 WWOXQ9NZC7 414 aa12.46□□□□□ -0.41
SMG6-201ENST00000263073 EVPLLA8MZ36 301 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 FCHO1O14526 889 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 FAM58BPP0C7Q3 252 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 CDC16Q13042 620 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 R3HDM1Q15032 1099 aaKnown RBP12.46□□□□□ -0.42
SMG6-201ENST00000263073 FASTKD5Q7L8L6 764 aaKnown RBP12.46□□□□□ -0.42
SMG6-201ENST00000263073 RDM1Q8NG50 284 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 TSPAN3O60637 253 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 ZMPSTE24O75844 475 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 PKNOX1P55347 436 aa12.46□□□□□ -0.42
SMG6-201ENST00000263073 SPOCD1Q6ZMY3 1216 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms