RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 C2orf81A6NN90 581 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 UBXN8O00124 270 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ALDH6A1Q02252 535 aaKnown RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 OVGP1Q12889 678 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 STAT4Q14765 748 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 GALNT4Q8N4A0 578 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 MED8Q96G25 268 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ZFP42Q96MM3 310 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 PSMC3IPQ9P2W1 217 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 KLF15Q9UIH9 416 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 MFSD1Q9H3U5 465 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 IL17RBQ9NRM6 502 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 NBNO60934 754 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 PGM1P36871 562 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 ERVK-24P63145 666 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 RABGAP1LQ5R372 815 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 TTC39BQ5VTQ0 682 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 ST13P4Q8IZP2 240 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 OTUB1Q96FW1 271 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
SPG11-201ENST00000261866 ABCA9Q8IUA7 1624 aa12.61□□□□□ -0.39
SPG11-201ENST00000261866 GJB6O95452 261 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 SREBF1P36956 1147 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 AP2B1P63010 937 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 ADIGQ0VDE8 80 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 EML3Q32P44 896 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 GMCL1P1Q8NEA9 526 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 LPCAT1Q8NF37 534 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 PDCD2LQ9BRP1 358 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 PALMDQ9NP74 551 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 MAN1C1Q9NR34 630 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 ZNF280DQ6N043 979 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 ASZ1Q8WWH4 475 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 DDX28Q9NUL7 540 aaKnown RBP12.6□□□□□ -0.39
SPG11-201ENST00000261866 HPCAP84074 193 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 DDR1Q08345 913 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
SPG11-201ENST00000261866 DEPDC1Q5TB30 811 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 PHF21AQ96BD5 680 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 UTP6Q9NYH9 597 aaKnown RBP12.6□□□□□ -0.39
SPG11-201ENST00000261866 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 EDRF1Q3B7T1 1238 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 METTL7BQ6UX53 244 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 GPC2Q8N158 579 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 ANKRD49Q8WVL7 239 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 SEMA6BQ9H3T3 888 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 FAM32AQ9Y421 112 aaKnown RBP12.6□□□□□ -0.39
SPG11-201ENST00000261866 SNCAIPQ9Y6H5 919 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 DIP2CQ9Y2E4 1556 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 KRT87PA6NCN2 255 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 NCALDP61601 193 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 PRKCQQ04759 706 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 GRIK5Q16478 980 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 OVOS1Q6IE37 1185 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 TMEM121Q9BTD3 319 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 TISP43B9A030 160 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
SPG11-201ENST00000261866 IL10P22301 178 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 RAD23BP54727 409 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 E4F1Q66K89 784 aaPredicted RBP12.6□□□□□ -0.39
SPG11-201ENST00000261866 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 CLEC4FQ8N1N0 589 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 TC2NQ8N9U0 490 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 FBXO10Q9UK96 956 aa12.6□□□□□ -0.39
SPG11-201ENST00000261866 FAM86B1E9PN63 330 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 FAM86B2P0C5J1 330 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 CYP11B1P15538 503 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 SPRP35270 261 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 MDM1Q8TC05 714 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 LPPQ93052 612 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 MANSC4A6NHS7 340 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 ALOX15P16050 662 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 TOB1P50616 345 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 TMC2Q8TDI7 906 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 PPIEQ9UNP9 301 aaKnown RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 HES2Q9Y543 173 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 FGFR2P21802 821 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 CCZ1BP86790 482 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 CCZ1P86791 482 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 SPATA21Q7Z572 469 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 EGFRP00533 1210 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 AMHP03971 560 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms