RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 TRIM42Q8IWZ5 723 aa19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 PRDM5Q9NQX1 630 aaPredicted RBP19.86■□□□□ 0.77
COL4A3BP-201ENST00000261415 PIRO00625 290 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 ENPP3O14638 875 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 CYP26A1O43174 497 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 KRT5P13647 590 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 POLE2P56282 527 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 ASTE1Q2TB18 679 aaPredicted RBP19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 ZNF571Q7Z3V5 609 aaPredicted RBP19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 LRRC52Q8N7C0 313 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 SYT15Q9BQS2 421 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 SMARCAL1Q9NZC9 954 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 ATXN10Q9UBB4 475 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 PCDHA13Q9Y5I0 950 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 ZSCAN5CA6NGD5 496 aaPredicted RBP19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 AKR1B10O60218 316 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 LRPAP1P30533 357 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 TMEM154Q6P9G4 183 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 LCA5Q86VQ0 697 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 UBR7Q8N806 425 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 PRCCQ92733 491 aaPredicted RBP19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 BCO2Q9BYV7 579 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 EHD2Q9NZN4 543 aa19.85■□□□□ 0.77
COL4A3BP-201ENST00000261415 TRIM43BA6NCK2 446 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 KIAA0355O15063 1070 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 ACADSP16219 412 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 SP100P23497 879 aaPredicted RBP19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 ITGB8P26012 769 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 COPS2P61201 443 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 HLTFQ14527 1009 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 MYBPC3Q14896 1274 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 GALNTL6Q49A17 601 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 TRIM43Q96BQ3 446 aaPredicted RBP19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 TLR10Q9BXR5 811 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 TMEM161AQ9NX61 479 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 INPP5FQ9Y2H2 1132 aa19.84■□□□□ 0.77
COL4A3BP-201ENST00000261415 INPPL1O15357 1258 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 TIMP1P01033 207 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 POMCP01189 267 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 WEE2P0C1S8 567 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 P4HA1P13674 534 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 GNAZP19086 355 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 RFC2P35250 354 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 EIF3BP55884 814 aaKnown RBP19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 TSNAXIP1Q2TAA8 658 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 TMEM270Q6UE05 265 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 SLC47A2Q86VL8 602 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 RNF10Q8N5U6 811 aaKnown RBP19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 ZNF560Q96MR9 790 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 PSMB7Q99436 277 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 ACP6Q9NPH0 428 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 CISHQ9NSE2 258 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 TMCO1Q9UM00 188 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 CNTN6Q9UQ52 1028 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 PCDHB4Q9Y5E5 795 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 PTPRSQ13332 1948 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 TSC2P49815 1807 aa19.83■□□□□ 0.77
COL4A3BP-201ENST00000261415 CD58P19256 250 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 RAP1GAPP47736 663 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 GFPT1Q06210 699 aaPredicted RBP19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 UAP1Q16222 522 aaPredicted RBP19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 CLLU1OSQ5K130 101 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 GLB1LQ6UWU2 654 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 EPS8L1Q8TE68 723 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 VWCEQ96DN2 955 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 RAB3IPQ96QF0 476 aaPredicted RBP19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 KRT12Q99456 494 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 SYT11Q9BT88 431 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 ZCWPW1Q9H0M4 648 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 ELAC1Q9H777 363 aaKnown RBP19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 SMYD3Q9H7B4 428 aa19.83■□□□□ 0.76
COL4A3BP-201ENST00000261415 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 ZNF263O14978 683 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 UBOX5O94941 541 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 LCA5LO95447 670 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 KRT16P08779 473 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 FGFR1P11362 822 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 BNIP1Q12981 228 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 OR2W6PQ8NHA6 318 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 LZICQ8WZA0 190 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 TLCD1Q96CP7 247 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 PBKQ96KB5 322 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 UBE2OQ9C0C9 1292 aaKnown RBP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 SDCBP2Q9H190 292 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 VCX3BQ9H321 246 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 CCDC134Q9H6E4 229 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 VCX3AQ9NNX9 186 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 CACNG4Q9UBN1 327 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 ADAMTS1Q9UHI8 967 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 GMEB1Q9Y692 573 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 MMEP08473 750 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 RAG1P15918 1043 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 PNPLA4P41247 253 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 SLC18A3Q16572 532 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 PABPC1LQ4VXU2 614 aaKnown RBP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 CNKSR3Q6P9H4 555 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 RBBP8NLQ8NC74 664 aaPredicted RBP19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 OLIG1Q8TAK6 271 aa19.82■□□□□ 0.76
COL4A3BP-201ENST00000261415 SLC20A1Q8WUM9 679 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms