RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 HAPLN2Q9GZV7 340 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 NPHS2Q9NP85 383 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ARL8BQ9NVJ2 186 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 KANSL3Q9P2N6 904 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 PSMC3IPQ9P2W1 217 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 CHORDC1Q9UHD1 332 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ANAPC7Q9UJX3 599 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ACKR2O00590 384 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 DNALI1O14645 258 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ALOX15BO15296 676 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 CREB3O43889 395 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 IL18RAPO95256 599 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ARIH2O95376 493 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ASS1P00966 412 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 IL1BP01584 269 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 LYNP07948 512 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 TSHZ1Q6ZSZ6 1077 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 MON1BQ7L1V2 547 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 RNF149Q8NC42 400 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 STKLD1Q8NE28 680 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 OLFM3Q96PB7 478 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ZWILCHQ9H900 591 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 TXNRD2Q9NNW7 524 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 KRT82Q9NSB4 513 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ERAP1Q9NZ08 941 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 COMMD3-BMI1R4GMX3 469 aa11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 ZNFX1Q9P2E3 1918 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-201ENST00000261007 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 PSTPIP1O43586 416 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TNNC2P02585 160 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TXNP10599 105 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 PROZP22891 400 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 CETN2P41208 172 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 SERPINB4P48594 390 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 NOMO3P69849 1222 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 CDK16Q00536 496 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TNFAIP2Q03169 654 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TAP1Q03518 808 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TRPC3Q13507 836 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 CNPY1Q3B7I2 92 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 WDR72Q3MJ13 1102 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 HSDL1Q3SXM5 330 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 DRICH1Q6PGQ1 229 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TMEM270Q6UE05 265 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 PRUNE1Q86TP1 453 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 C4orf33Q8N1A6 199 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 ZNF276Q8N554 614 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 HAPLN3Q96S86 360 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 HERPUD2Q9BSE4 406 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 MIS12Q9H081 205 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 FZD8Q9H461 694 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 APOBEC3GQ9HC16 384 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 ATXN10Q9UBB4 475 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 HEY2Q9UBP5 337 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 TBC1D30Q9Y2I9 924 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 COL1A2P08123 1366 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 PTPRJQ12913 1337 aa11.29□□□□□ -0.6
CHRNA1-201ENST00000261007 FAM170AA1A519 330 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 CFAP69A5D8W1 941 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 FAM189A1O60320 539 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 B4GALT4O60513 344 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 PROSCO94903 275 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 CALB1P05937 261 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 PGK2P07205 417 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 RARBP10826 455 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 ESRRAP11474 423 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 VPS41P49754 854 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 ZNF132P52740 706 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 ARFIP2P53365 341 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 MORF4L2Q15014 288 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 P3H1Q32P28 736 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
CHRNA1-201ENST00000261007 RASIP1Q5U651 963 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms