RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 HCRTO43612 131 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 SUN1O94901 812 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 NPTXRO95502 500 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ASMTLO95671 621 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 SNAI1O95863 264 aaPredicted RBP17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 MNAT1P51948 309 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ARL4CP56559 192 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 MGAT5Q09328 741 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 GRIK4Q16099 956 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ICE2Q659A1 982 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 PMF1Q6P1K2 205 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 C1orf228Q6PIY5 440 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ACOT1Q86TX2 421 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 A0A1B0GUA9 196 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 MCF2LO15068 1137 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 EPHX2P34913 555 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 DPYSL3Q14195 570 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 SLC1A5Q15758 541 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 GLRA4Q5JXX5 417 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 SCYL2Q6P3W7 929 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 LCLAT1Q6UWP7 414 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 PCGF5Q86SE9 256 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 IGDCC3Q8IVU1 814 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 FBF1Q8TES7 1133 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 NT5C1AQ9BXI3 368 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 ZNF408Q9H9D4 720 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 PSMC3IPQ9P2W1 217 aaPredicted RBP17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 PNMA3Q9UL41 463 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 C2CD2Q9Y426 696 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 SNX9Q9Y5X1 595 aa17.3■□□□□ 0.36
UBQLN1-201ENST00000257468 IL9RQ01113 521 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 EFHC2Q5JST6 749 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 DARS2Q6PI48 645 aaKnown RBP17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 C3orf62Q6ZUJ4 267 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 TTC30AQ86WT1 665 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 SGSM3Q96HU1 749 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 FAXDC2Q96IV6 333 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 SMC6Q96SB8 1091 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 CNPY3Q9BT09 278 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 FAM49AQ9H0Q0 323 aaPredicted RBP17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 RSAD1Q9HA92 442 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 VTA1Q9NP79 307 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 SLCO1B3Q9NPD5 702 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 SNTG2Q9NY99 539 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 PRKAG3Q9UGI9 489 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 CHMP2BQ9UQN3 213 aa17.29■□□□□ 0.36
UBQLN1-201ENST00000257468 PDHXO00330 501 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 ADCY6O43306 1168 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 YBX3P16989 372 aaKnown RBP eCLIP17.28■□□□□ 0.367e-9■■□□□ 13.1
UBQLN1-201ENST00000257468 SMPD1P17405 629 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 CA4P22748 312 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 PCK1P35558 622 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 GEMIN4P57678 1058 aaKnown RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 ROR1Q01973 937 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 MTFR1Q15390 333 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 CCDC14Q49A88 953 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 SCUBE3Q8IX30 993 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 FITM2Q8N6M3 262 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 C18orf25Q96B23 403 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 EIF2AQ9BY44 585 aaKnown RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 C12orf65Q9H3J6 166 aaKnown RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 CDHR5Q9HBB8 845 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 GBA2Q9HCG7 927 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 NGRNQ9NPE2 291 aaKnown RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 SETD4Q9NVD3 440 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 ARL2BPQ9Y2Y0 163 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 PRPF4O43172 522 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 GABBR2O75899 941 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 NR1H3Q13133 447 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 NOMO1Q15155 1222 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 CA9Q16790 459 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 TBC1D1Q86TI0 1168 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 PAFAH2Q99487 392 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 KLF6Q99612 283 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 PITPNM3Q9BZ71 974 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 GJD2Q9UKL4 321 aa17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
UBQLN1-201ENST00000257468 LOC102724159A0A0B4J2E5 919 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 GOLGA8RI6L899 631 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 PRPSAP2O60256 369 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 AVILO75366 819 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 ENDOD1O94919 500 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 GSTA1P08263 222 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 FGFR1P11362 822 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 KRT4P19013 534 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 ACAP1Q15027 740 aa17.27■□□□□ 0.36
UBQLN1-201ENST00000257468 PWP2Q15269 919 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms