RNA–Protein interactions for RNA: ENST00000255390.9

SCO1-201, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCO1, Length 9,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-201ENST00000255390 PYCARDQ9ULZ3 195 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 TNFSF13BQ9Y275 285 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 CROCCQ5TZA2 2017 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 KIAA0232Q92628 1395 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 OPLAHO14841 1288 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 ITGA3P26006 1051 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
SCO1-201ENST00000255390 CCNIQ14094 377 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 RESP18Q5W5W9 173 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
SCO1-201ENST00000255390 MEI4A8MW99 385 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 TGM2P21980 687 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 MRNIPQ6NTE8 343 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 GPRASP2Q96D09 838 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 DDX47Q9H0S4 455 aaKnown RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 SH3BP4Q9P0V3 963 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ZNF23P17027 643 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 CAMK1DQ8IU85 385 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ZNF786Q8N393 782 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 TINF2Q9BSI4 451 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 CNPPD1Q9BV87 410 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ERVV-1B6SEH8 477 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 HSPA13P48723 471 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 SMTNL2Q2TAL5 461 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 ZNF589Q86UQ0 364 aaPredicted RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 IQCF2Q8IXL9 164 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 SLC9A8Q9Y2E8 581 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ENDOD1O94919 500 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 OR6B1O95007 311 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 HSD3B2P26439 372 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 PRCPP42785 496 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 TSNQ15631 228 aaKnown RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 PEX5P50542 639 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 DDR2Q16832 855 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 EFHC1Q5JVL4 640 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ULK3Q6PHR2 472 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 CCDC185Q8N715 623 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 GMCL1Q96IK5 515 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 MYL12AP19105 171 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 PTGER2P43116 358 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 BBS4Q96RK4 519 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 SOHLH2Q9NX45 425 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 RHBDL2Q9NX52 303 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 IGFBP4P22692 258 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 IRX1P78414 480 aaPredicted RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 NEK7Q8TDX7 302 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 AGPAT1Q99943 283 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 TIPINQ9BVW5 301 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 PRRG4Q9BZD6 226 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ZNF624Q9P2J8 865 aaPredicted RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 VPS28Q9UK41 221 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 SCGNO76038 276 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 SNUPNO95149 360 aaKnown RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 NPTXRO95502 500 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 ATP6V1B1P15313 513 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 CHRNB3Q05901 458 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 PTPAQ15257 358 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 MARK2Q7KZI7 788 aaKnown RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 CHPFQ8IZ52 775 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 IGFLR1Q9H665 355 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 MARK1Q9P0L2 795 aa11.76□□□□□ -0.53
SCO1-201ENST00000255390 CHORDC1Q9UHD1 332 aaPredicted RBP11.76□□□□□ -0.53
SCO1-201ENST00000255390 NCAPD2Q15021 1401 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 ATP6V1B2P21281 511 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 WARSP23381 471 aaKnown RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 YY1P25490 414 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 IL12RB1P42701 662 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 CLK3P49761 638 aaKnown RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 ITIH5Q86UX2 942 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 ATG16L2Q8NAA4 619 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 RFFLQ8WZ73 363 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 PAK5Q9P286 719 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 RUVBL2Q9Y230 463 aaKnown RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 NEU2Q9Y3R4 380 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 PCDHGA3Q9Y5H0 932 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 MTA2O94776 668 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 ZNF512BQ96KM6 892 aaPredicted RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 CYP2C9P11712 490 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 RCVRNP35243 200 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 NUP107P57740 925 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 ATF7IP2Q5U623 682 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 MCOLN3Q8TDD5 553 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 HPDLQ96IR7 371 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 RPRD1AQ96P16 312 aaPredicted RBP11.75□□□□□ -0.53
SCO1-201ENST00000255390 ROGDIQ9GZN7 287 aa11.75□□□□□ -0.53
SCO1-201ENST00000255390 KLHL3Q9UH77 587 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms