RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 NDRG1Q92597 394 aaKnown RBP19.83■□□□□ 0.77
TRIM47-201ENST00000254816 MAGOHBQ96A72 148 aaKnown RBP19.83■□□□□ 0.77
TRIM47-201ENST00000254816 ZNF333Q96JL9 665 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 CFAP57Q96MR6 1250 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 TRIM51Q9BSJ1 452 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 GDF3Q9NR23 364 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 KRT82Q9NSB4 513 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 PCDHB7Q9Y5E2 793 aa19.83■□□□□ 0.77
TRIM47-201ENST00000254816 M0QZQ0 153 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 MAP3K7CLP57077 242 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 DSC1Q08554 894 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 EMBQ6PCB8 327 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 CLEC20AQ6ZU45 233 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 COLGALT2Q8IYK4 626 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 CCDC26Q8TAB7 109 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 C1orf54Q8WWF1 131 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 RAPGEF5Q92565 580 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 TMEM209Q96SK2 561 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 RHOBTB2Q9BYZ6 727 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 CDH9Q9ULB4 789 aa19.83■□□□□ 0.76
TRIM47-201ENST00000254816 PRG3Q9Y2Y8 225 aaPredicted RBP19.83■□□□□ 0.76
TRIM47-201ENST00000254816 MICAL3Q7RTP6 2002 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 DCDC2CA8MYV0 355 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 XPO1O14980 1071 aaKnown RBP19.82■□□□□ 0.76
TRIM47-201ENST00000254816 KRT10P13645 584 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 NPR3P17342 541 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 ZNF143P52747 638 aaPredicted RBP19.82■□□□□ 0.76
TRIM47-201ENST00000254816 CACNA2D1P54289 1103 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 ATP11AP98196 1134 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 KAZNQ674X7 775 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 MFSD7Q6UXD7 560 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 METTL23Q86XA0 190 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 DDX42Q86XP3 938 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRIM47-201ENST00000254816 SLITRK1Q96PX8 696 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 TMEM30AQ9NV96 361 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 HCSTQ9UBK5 93 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 MTUS1Q9ULD2 1270 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 FNDC1Q4ZHG4 1894 aaPredicted RBP19.82■□□□□ 0.76
TRIM47-201ENST00000254816 NLRC5Q86WI3 1866 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 MIPP30301 263 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 KCNJ1P48048 391 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 ADCY2Q08462 1091 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 ADIGQ0VDE8 80 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 CCDC14Q49A88 953 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 LRRC38Q5VT99 294 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 FAM35AQ86V20 835 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 ATG4AQ8WYN0 398 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 SUSD3Q96L08 255 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 FAM193BQ96PV7 902 aaPredicted RBP19.82■□□□□ 0.76
TRIM47-201ENST00000254816 FAM118BQ9BPY3 351 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 OSBPL8Q9BZF1 889 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 PCDH10Q9P2E7 1040 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 ATP11BQ9Y2G3 1177 aa19.82■□□□□ 0.76
TRIM47-201ENST00000254816 VWA8A3KMH1 1905 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.81■□□□□ 0.76
TRIM47-201ENST00000254816 RNF8O76064 485 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 CYP11A1P05108 521 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 RPL34P49207 117 aaKnown RBP19.81■□□□□ 0.76
TRIM47-201ENST00000254816 DR1Q01658 176 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 PLCB3Q01970 1234 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 SNX1Q13596 522 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 ZSCAN26Q16670 478 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 CCDC137Q6PK04 289 aaKnown RBP19.81■□□□□ 0.76
TRIM47-201ENST00000254816 MAATS1Q7Z4T9 603 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 GOLGA6L1Q8N7Z2 621 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 OR10T2Q8NGX3 314 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 MYCBPAPQ8TBZ2 947 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 CAVIN3Q969G5 261 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 KCNK16Q96T55 309 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 ASNSD1Q9NWL6 643 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 R3HDM2Q9Y2K5 976 aaKnown RBP19.81■□□□□ 0.76
TRIM47-201ENST00000254816 PTPRDP23468 1912 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 LRRD1A4D1F6 860 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 AP1G2O75843 785 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 FAM200BP0CF97 657 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 NDUFV1P49821 464 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 BCAR1P56945 870 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 SNX16P57768 344 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 OVOS1Q6IE37 1185 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 CTU1Q7Z7A3 348 aaKnown RBP19.81■□□□□ 0.76
TRIM47-201ENST00000254816 RCOR2Q8IZ40 523 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 ABI1Q8IZP0 508 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 MYLPFQ96A32 169 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 HSFY1Q96LI6 401 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 PEBP4Q96S96 227 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 SMOQ99835 787 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 CNPY3Q9BT09 278 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 CHST7Q9NS84 486 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 TMLHEQ9NVH6 421 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 LRFN2Q9ULH4 789 aa19.81■□□□□ 0.76
TRIM47-201ENST00000254816 TFE3P19532 575 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-201ENST00000254816 PCSK1P29120 753 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 CHRNA3P32297 505 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 SLC8A3P57103 927 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 KLF1Q13351 362 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-201ENST00000254816 CYP1B1Q16678 543 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 ODF2Q5BJF6 829 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 ZDHHC17Q8IUH5 632 aa19.8■□□□□ 0.76
TRIM47-201ENST00000254816 RBM41Q96IZ5 413 aaKnown RBP19.8■□□□□ 0.76
TRIM47-201ENST00000254816 CASD1Q96PB1 797 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms