RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 BBS12Q6ZW61 710 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 RFX6Q8HWS3 928 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 C18orf25Q96B23 403 aaPredicted RBP19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 OSBPL7Q9BZF2 842 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 FAM49BQ9NUQ9 324 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 NME7Q9Y5B8 376 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 NRCAMQ92823 1304 aa19.6■□□□□ 0.73
PDLIM4-201ENST00000253754 HCRTO43612 131 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 DUSP11O75319 330 aaKnown RBP19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 BRAFP15056 766 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 GCAP28676 217 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 GRM5P41594 1212 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 PSEN2P49810 448 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 TAZQ16635 292 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 GOLGA7BQ2TAP0 167 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 TAX1BP1Q86VP1 789 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 ZBED8Q8IZ13 594 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 PRCCQ92733 491 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 NT5C1AQ9BXI3 368 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 ADAMTS10Q9H324 1103 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 SNX9Q9Y5X1 595 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 MYADML2A6NDP7 307 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 MORF4L2Q15014 288 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 TMED2Q15363 201 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 PPP1R26Q5T8A7 1209 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 NPNTQ6UXI9 565 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 CYP4V2Q6ZWL3 525 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 ACOT1Q86TX2 421 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 CCDC13Q8IYE1 715 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 REM2Q8IYK8 340 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 GDAP1Q8TB36 358 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 DYDC1Q8WWB3 177 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 RXFP2Q8WXD0 754 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 OSMRQ99650 979 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 CCDC134Q9H6E4 229 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 RNF186Q9NXI6 227 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 EURLQ9NYK6 297 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 LGALS13Q9UHV8 139 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 CAPN7Q9Y6W3 813 aa19.59■□□□□ 0.73
PDLIM4-201ENST00000253754 CDH16O75309 829 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 RNF8O76064 485 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 ATP5DP30049 168 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 CTCFP49711 727 aaPredicted RBP19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 ZNF143P52747 638 aaPredicted RBP19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 GNASQ5JWF2 1037 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 LCLAT1Q6UWP7 414 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 ANKMY2Q8IV38 441 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 UNC45BQ8IWX7 931 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 MRRFQ96E11 262 aaKnown RBP19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 ADAM33Q9BZ11 813 aa19.58■□□□□ 0.73
PDLIM4-201ENST00000253754 EXOC1LA0A1B0GW35 172 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 PDGFRAP16234 1089 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 GPD1P21695 349 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 PDIA2Q13087 525 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 HIC1Q14526 733 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 STAT4Q14765 748 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 KYAT1Q16773 422 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 FBXW10Q5XX13 1052 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 PMF1Q6P1K2 205 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 CCDC121Q6ZUS5 278 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 FAM71DQ8N9W8 422 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 CMASQ8NFW8 434 aaPredicted RBP19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 CFAP57Q96MR6 1250 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 ELAC2Q9BQ52 826 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 VPS37BQ9H9H4 285 aa19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 FARP1Q9Y4F1 1045 aaPredicted RBP19.58■□□□□ 0.72
PDLIM4-201ENST00000253754 TCRBV7S3A2A0A539 114 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 C2CD4BA6NLJ0 364 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 HAS3O00219 553 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 ATP2C2O75185 946 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 PGK1P00558 417 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 ELNP15502 786 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 RPL22P35268 128 aaKnown RBP19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 ATP11AP98196 1134 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 PURAQ00577 322 aaKnown RBP19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 CACNB2Q08289 660 aaPredicted RBP19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 CATSPER4Q7RTX7 472 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 ZNF410Q86VK4 478 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 TTC30AQ86WT1 665 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 CPT1BQ92523 772 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 APOL6Q9BWW8 343 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 FOXP3Q9BZS1 431 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 NXF3Q9H4D5 531 aaKnown RBP19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 ASNSD1Q9NWL6 643 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 EFR3BQ9Y2G0 817 aa19.57■□□□□ 0.72
PDLIM4-201ENST00000253754 POC1B-GALNT4F8VUJ3 575 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 GPR32O75388 356 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 PIAS1O75925 651 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 CPP00450 1065 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 ABHD2P08910 425 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 ZNF200P98182 395 aaPredicted RBP19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 CCDC142Q17RM4 750 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 TTC31Q49AM3 519 aaPredicted RBP19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 MSS51Q4VC12 460 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 RSAD2Q8WXG1 361 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 CCDC77Q9BR77 488 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 SHOC2Q9UQ13 582 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 TCP11X1B4DZS4 312 aa19.56■□□□□ 0.72
PDLIM4-201ENST00000253754 CYP2C9P11712 490 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms