RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
RFPL3-201ENST00000249007 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
RFPL3-201ENST00000249007 C12orf40Q86WS4 652 aa12.86□□□□□ -0.35
RFPL3-201ENST00000249007 ADGRG2Q8IZP9 1017 aa12.86□□□□□ -0.35
RFPL3-201ENST00000249007 ZNF513Q8N8E2 541 aaPredicted RBP12.86□□□□□ -0.35
RFPL3-201ENST00000249007 PPP1R9BQ96SB3 815 aa12.86□□□□□ -0.35
RFPL3-201ENST00000249007 A0A1B0GTW7 788 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PYCARD-AS1I3L0S3 204 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 LEFTY2O00292 366 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PLK4O00444 970 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 ADH1CP00326 375 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 MUTP22033 750 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 MATKP42679 507 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PDE6CP51160 858 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 ZXDBP98169 803 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TSPY1Q01534 308 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 SEMG2Q02383 582 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 NFE2Q16621 373 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TSPAN18Q96SJ8 248 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 FLNCQ14315 2725 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 DOPEY2Q9Y3R5 2298 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 UBR5O95071 2799 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PIRO00625 290 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 SLC9A3R1O14745 358 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 SCAMP3O14828 347 aaKnown RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TLX3O43711 291 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 DTNBO60941 627 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 NFICP08651 508 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 NDUFV2P19404 249 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 MCM7P33993 719 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 ECM1Q16610 540 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 SKOR2Q2VWA4 1001 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 IL27RAQ6UWB1 636 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 ZCCHC9Q8N567 271 aaKnown RBP12.85□□□□□ -0.35
RFPL3-201ENST00000249007 FAM181AQ8N9Y4 354 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 HAPLN2Q9GZV7 340 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 C17orf75Q9HAS0 396 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 PCDHGB2Q9Y5G2 931 aa12.85□□□□□ -0.35
RFPL3-201ENST00000249007 TEP1Q99973 2627 aaKnown RBP12.84□□□□□ -0.35
RFPL3-201ENST00000249007 A0A1W2PQF6 199 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 MEI4A8MW99 385 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 BTBD18B2RXH4 712 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 ERVH48-1M5A8F1 160 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 TNFSF14O43557 240 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 ADH5P11766 374 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 CYP2F1P24903 491 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 CCT6AP40227 531 aaKnown RBP12.84□□□□□ -0.35
RFPL3-201ENST00000249007 WASP42768 502 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 KYAT1Q16773 422 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 PTPRNQ16849 979 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 HLA-BQ31612 363 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 JADE1Q6IE81 842 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 RHBDF2Q6PJF5 856 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 DHRS13Q6UX07 377 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 DBX2Q6ZNG2 339 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 BAP1Q92560 729 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 MIR1-1HGQ9H1L0 117 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 RPF1Q9H9Y2 349 aaKnown RBP12.84□□□□□ -0.35
RFPL3-201ENST00000249007 ABCB6Q9NP58 842 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 DNMT3LQ9UJW3 386 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFPL3-201ENST00000249007 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 BTBD3Q9Y2F9 522 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 TCHHQ07283 1943 aa12.84□□□□□ -0.35
RFPL3-201ENST00000249007 BOD1L1Q8NFC6 3051 aa12.83□□□□□ -0.35
RFPL3-201ENST00000249007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
RFPL3-201ENST00000249007 NTSR1P30989 418 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 TAF6P49848 677 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.36
RFPL3-201ENST00000249007 MAPK7Q13164 816 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 C6orf118Q5T5N4 469 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 TMPRSS12Q86WS5 348 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 KIAA1958Q8N8K9 716 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 TMEM161BQ8NDZ6 487 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 LEO1Q8WVC0 666 aaPredicted RBP12.83□□□□□ -0.36
RFPL3-201ENST00000249007 DNASE2BQ8WZ79 361 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 WASF1Q92558 559 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 ERLEC1Q96DZ1 483 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 BICD1Q96G01 975 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 ARID3AQ99856 593 aa12.83□□□□□ -0.36
RFPL3-201ENST00000249007 NTPCRQ9BSD7 190 aaKnown RBP12.83□□□□□ -0.36
RFPL3-201ENST00000249007 CD93Q9NPY3 652 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms