RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 GSTM1P09488 218 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 NUDT17P0C025 328 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 SLC26A3P40879 764 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 NAPAP54920 295 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 POLR2GP62487 172 aaKnown RBP eCLIP5.94□□□□□ -1.46
RFX4-201ENST00000229387 RNASELQ05823 741 aaKnown RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 TTBK2Q6IQ55 1244 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 UGT2A3Q6UWM9 527 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 KCTD20Q7Z5Y7 419 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 COL23A1Q86Y22 540 aaPredicted RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 SULF1Q8IWU6 871 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 ZFPM1Q8IX07 1006 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 TERB1Q8NA31 727 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 BCL7CQ8WUZ0 217 aaPredicted RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 AFG1LQ8WV93 481 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 EMID1Q96A84 441 aaPredicted RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 REXO5Q96IC2 774 aaKnown RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 ZNF641Q96N77 438 aaPredicted RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 INPP4AQ96PE3 977 aaPredicted RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 SMAD5Q99717 465 aaKnown RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 TMEM109Q9BVC6 243 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 TDRD1Q9BXT4 1180 aaKnown RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 WASH6PQ9NQA3 447 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 SAR1AQ9NR31 198 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 ZNF277Q9NRM2 450 aaPredicted RBP5.94□□□□□ -1.46
RFX4-201ENST00000229387 ASIC3Q9UHC3 531 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 SALL4Q9UJQ4 1053 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 GGA1Q9UJY5 639 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 RABGAP1Q9Y3P9 1069 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 RWDD3Q9Y3V2 267 aa5.94□□□□□ -1.46
RFX4-201ENST00000229387 FOXN3O00409 490 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 DDX3XO00571 662 aaKnown RBP eCLIP5.93□□□□□ -1.46
RFX4-201ENST00000229387 XPO1O14980 1071 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 POLR1CO15160 346 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 ZW10O43264 779 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 SIN3BO75182 1162 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 PCNAP12004 261 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 UQCRBP14927 111 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CXCR2P25025 360 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 PRKAR1BP31321 381 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 RPL9P32969 192 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 PSMC2P35998 433 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 TECP42680 631 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CDK8P49336 464 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CLK3P49761 638 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 MGAT5Q09328 741 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 C16orf72Q14CZ0 275 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 MEA1Q16626 185 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 KRT71Q3SY84 523 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 PPP6R3Q5H9R7 873 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 KCTD1Q719H9 257 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 GPR141Q7Z602 305 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 GALNT11Q8NCW6 608 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 TTLQ8NG68 377 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 C1orf216Q8TAB5 229 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 ACTRT2Q8TDY3 377 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 TUBB6Q9BUF5 446 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 MTMR12Q9C0I1 747 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 STMN4Q9H169 189 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 IFT22Q9H7X7 185 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 SIRT5Q9NXA8 310 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
RFX4-201ENST00000229387 RTL9Q8NET4 1388 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 DOT1LQ8TEK3 1739 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 ATRNO75882 1429 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 GOLGA8JA6NMD2 632 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 TRIM77I1YAP6 450 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 K7EPI3 171 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 RNF225M0QZC1 329 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 TK2O00142 265 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 AREL1O15033 823 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CLPTM1O96005 669 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 PRKCAP17252 672 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CDH2P19022 906 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 EPHB2P29323 1055 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CDK9P50750 372 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 DNA2P51530 1060 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 POLGP54098 1239 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 OLR1P78380 273 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 KLHL30Q0D2K2 578 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 NFIAQ12857 509 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 CNGA2Q16280 664 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 UBE2SQ16763 222 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 EDRF1Q3B7T1 1238 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 NADK2Q4G0N4 442 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 IGSF11Q5DX21 431 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 ACSBG2Q5FVE4 666 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 SLC10A5Q5PT55 438 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 RNASEH2BQ5TBB1 312 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 METTL11BQ5VVY1 283 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 IZUMO2Q6UXV1 221 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 DSTYKQ6XUX3 929 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 FRA10AC1Q70Z53 315 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 DYMQ7RTS9 669 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 MRPL10Q7Z7H8 261 aaKnown RBP5.93□□□□□ -1.46
RFX4-201ENST00000229387 PDSS2Q86YH6 399 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 BLIDQ8IZY5 108 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 MINDY2Q8NBR6 621 aa5.93□□□□□ -1.46
RFX4-201ENST00000229387 OR2W6PQ8NHA6 318 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms