RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 MMS22LQ6ZRQ5 1243 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 MRPL10Q7Z7H8 261 aaKnown RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 TFAP2BQ92481 460 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 RUFY1Q96T51 708 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 C11orf70Q9BRQ4 267 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 DDX47Q9H0S4 455 aaKnown RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.618e-7■■■■■ 69.9
CDCA3-201ENST00000229265 SNTG2Q9NY99 539 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 WHRNQ9P202 907 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 MTRF1LQ9UGC7 380 aaKnown RBP11.22□□□□□ -0.61
CDCA3-201ENST00000229265 CDH22Q9UJ99 828 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 GIT1Q9Y2X7 761 aa11.22□□□□□ -0.61
CDCA3-201ENST00000229265 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ZNF487B1APH4 448 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 SMAPO00193 183 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 O00370 1275 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 MEFVO15553 781 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 RNF8O76064 485 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 SYF2O95926 243 aaKnown RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 GAS8O95995 478 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ITGB1P05556 798 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 MYBL2P10244 700 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 RARAP10276 462 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ITGA4P13612 1032 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 CD19P15391 556 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 OAS2P29728 719 aaKnown RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 RPL9P32969 192 aaKnown RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 DNA2P51530 1060 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 KLF1Q13351 362 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 SIX1Q15475 284 aaPredicted RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 BOLA3Q53S33 107 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 TCEAL5Q5H9L2 206 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 C9orf57Q5W0N0 161 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 CCDC105Q8IYK2 499 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 TOP6BLQ8N6T0 577 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 CCDC89Q8N998 374 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 IPO4Q8TEX9 1081 aaKnown RBP11.21□□□□□ -0.61
CDCA3-201ENST00000229265 TNIP3Q96KP6 325 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 HSFY1Q96LI6 401 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 YME1L1Q96TA2 773 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ADAM2Q99965 735 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 OSBPL8Q9BZF1 889 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 CXCL16Q9H2A7 254 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 CWH43Q9H720 699 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 SMARCAL1Q9NZC9 954 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 THEGQ9P2T0 379 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 HESX1Q9UBX0 185 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 ADAM21Q9UKJ8 722 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 INSL6Q9Y581 213 aa11.21□□□□□ -0.61
CDCA3-201ENST00000229265 MYH10P35580 1976 aa11.21□□□□□ -0.62
CDCA3-201ENST00000229265 ARHGEF37A1IGU5 675 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 TMEM110-MUSTN1A8MSY1 372 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 KPNA7A9QM74 516 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 H3BNC9 293 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 AGPSO00116 658 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 TTI1O43156 1089 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 PPFIA2O75334 1257 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 ZMYND10O75800 440 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 ZNF189O75820 626 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 PARNO95453 639 aaKnown RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 ECEL1O95672 775 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 CFHP08603 1231 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 IL9P15248 144 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 BRD2P25440 801 aaKnown RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 TAF6P49848 677 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 RAB27AP51159 221 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 NDST1P52848 882 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 HLTFQ14527 1009 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 TAZQ16635 292 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 PKDCCQ504Y2 493 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 UBXN11Q5T124 520 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 TMEM173Q86WV6 379 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 CDR2LQ86X02 465 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 JAMLQ86YT9 394 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 TMEM86AQ8N2M4 240 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 ANKRD52Q8NB46 1076 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 CMASQ8NFW8 434 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 BCL7CQ8WUZ0 217 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 CLP1Q92989 425 aaKnown RBP11.2□□□□□ -0.62
CDCA3-201ENST00000229265 ART4Q93070 314 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 ELOVL4Q9GZR5 314 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 POLIQ9UNA4 740 aa11.2□□□□□ -0.62
CDCA3-201ENST00000229265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 H3BQ06 376 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 TBX10O75333 385 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms