RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 KIAA1257Q9ULG3 409 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 BARX2Q9UMQ3 279 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-201ENST00000221922 SHOC2Q9UQ13 582 aa23.24■■□□□ 1.31
CCDC9-201ENST00000221922 A6NJR5 290 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 ETS1P14921 441 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 CDC42EP1Q00587 391 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 INCA1Q0VD86 236 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 TAZQ16635 292 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 BBS12Q6ZW61 710 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 PCGF5Q86SE9 256 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 GIMAP7Q8NHV1 300 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 TRABDQ9H4I3 376 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 CXorf56Q9H5V9 222 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 EBF2Q9HAK2 575 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 HMGXB4Q9UGU5 601 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 SMG5Q9UPR3 1016 aaKnown RBP23.23■■□□□ 1.31
CCDC9-201ENST00000221922 SGK1O00141 431 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 RNF8O76064 485 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 KDELR1P24390 212 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 FASTKD3Q14CZ7 662 aaKnown RBP23.23■■□□□ 1.31
CCDC9-201ENST00000221922 MORN1Q5T089 497 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 HAUS1Q96CS2 278 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 ADAMTS10Q9H324 1103 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 DPP3Q9NY33 737 aa23.23■■□□□ 1.31
CCDC9-201ENST00000221922 ORC1Q13415 861 aa23.22■■□□□ 1.31
CCDC9-201ENST00000221922 TLDC1Q6P9B6 456 aa23.22■■□□□ 1.31
CCDC9-201ENST00000221922 APBB1IPQ7Z5R6 666 aaPredicted RBP23.22■■□□□ 1.31
CCDC9-201ENST00000221922 ARFGAP1Q8N6T3 406 aa23.22■■□□□ 1.31
CCDC9-201ENST00000221922 HEXIM2Q96MH2 286 aaKnown RBP23.22■■□□□ 1.31
CCDC9-201ENST00000221922 SETD4Q9NVD3 440 aa23.22■■□□□ 1.31
CCDC9-201ENST00000221922 ASNSD1Q9NWL6 643 aa23.22■■□□□ 1.31
CCDC9-201ENST00000221922 F2P00734 622 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 KRT16P08779 473 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 IL1R2P27930 398 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 GPD2P43304 727 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 MYO1EQ12965 1108 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 SPARCL1Q14515 664 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 SMTNL2Q2TAL5 461 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 GPATCH11Q8N954 259 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 TBC1D31Q96DN5 1066 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 SLC24A2Q9UI40 661 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 CST8O60676 142 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 SPAG7O75391 227 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 ELF1P32519 619 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 MAP2K5Q13163 448 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 STILQ15468 1287 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 PKN2Q16513 984 aaKnown RBP23.21■■□□□ 1.31
CCDC9-201ENST00000221922 CENPUQ71F23 418 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 TMEM130Q8N3G9 435 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 EMC1Q8N766 993 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 PRCCQ92733 491 aaPredicted RBP23.21■■□□□ 1.31
CCDC9-201ENST00000221922 TMEM121Q9BTD3 319 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 GNEQ9Y223 722 aaKnown RBP23.21■■□□□ 1.31
CCDC9-201ENST00000221922 NRCAMQ92823 1304 aa23.21■■□□□ 1.31
CCDC9-201ENST00000221922 POC1B-GALNT4F8VUJ3 575 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 UNC5CO95185 931 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 PCK1P35558 622 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 OTUD4Q01804 1114 aaKnown RBP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 PCBP1Q15365 356 aaKnown RBP eCLIP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 KIZQ2M2Z5 673 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 KIF2BQ8N4N8 673 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 ACTL9Q8TC94 416 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 SMC6Q96SB8 1091 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 GCOM2Q9BZD3 368 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 PHACTR1Q9C0D0 580 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 PLEKHA5Q9HAU0 1116 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 DERAQ9Y315 318 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 IFNB1P01574 187 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 PDK4Q16654 411 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 FAM102AQ5T9C2 384 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 LCLAT1Q6UWP7 414 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 FAM47EQ6ZV65 393 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 ZBED8Q8IZ13 594 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 KCTD6Q8NC69 237 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 CMASQ8NFW8 434 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 AGAP11Q8TF27 550 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 PAIP2Q9BPZ3 127 aaKnown RBP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 NT5C1AQ9BXI3 368 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 VPS37BQ9H9H4 285 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 FETUBQ9UGM5 382 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 CPA4Q9UI42 421 aa23.2■■□□□ 1.3
CCDC9-201ENST00000221922 FARP1Q9Y4F1 1045 aaPredicted RBP23.2■■□□□ 1.3
CCDC9-201ENST00000221922 SMIM35A0A1B0GVV1 85 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 MBLAC1A4D2B0 266 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-201ENST00000221922 DYNC1LI2O43237 492 aaPredicted RBP23.19■■□□□ 1.3
CCDC9-201ENST00000221922 GPR32O75388 356 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 SMIM10L2AP0DMW4 78 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 SMIM10L2BP0DMW5 78 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 MIPP30301 263 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 MSH2P43246 934 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 NDST1P52848 882 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 YARSP54577 528 aaKnown RBP23.19■■□□□ 1.3
CCDC9-201ENST00000221922 DYNLT1P63172 113 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 KCNT1Q5JUK3 1230 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 KIF12Q96FN5 646 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 PHTF1Q9UMS5 762 aa23.19■■□□□ 1.3
CCDC9-201ENST00000221922 TYROBPO43914 113 aa23.18■■□□□ 1.3
CCDC9-201ENST00000221922 TRUB2O95900 331 aaKnown RBP23.18■■□□□ 1.3
CCDC9-201ENST00000221922 KRT15P19012 456 aa23.18■■□□□ 1.3
CCDC9-201ENST00000221922 HOXA11P31270 313 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms