RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 EIF3HO15372 352 aaKnown RBP eCLIP31.1■■■□□ 2.57
PABPN1-201ENST00000216727 GRAP2O75791 330 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 CCDC130P13994 396 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 OTUD4Q01804 1114 aaKnown RBP31.1■■■□□ 2.57
PABPN1-201ENST00000216727 TRIM32Q13049 653 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 TAF5Q15542 800 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 FAM47CQ5HY64 1035 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 CEP128Q6ZU80 1094 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 ARCQ7LC44 396 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 CASP8AP2Q9UKL3 1982 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 DNALI1O14645 258 aaPredicted RBP31.1■■■□□ 2.57
PABPN1-201ENST00000216727 NDC80O14777 642 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 PRPSAP2O60256 369 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 SDC4P31431 198 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 ARSEP51690 589 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 UBAP2Q5T6F2 1119 aaKnown RBP31.1■■■□□ 2.57
PABPN1-201ENST00000216727 GLIS1Q8NBF1 620 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 ADAM7Q9H2U9 754 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 PCDH9Q9HC56 1237 aa31.1■■■□□ 2.57
PABPN1-201ENST00000216727 GTF3C5Q9Y5Q8 519 aaPredicted RBP31.1■■■□□ 2.57
PABPN1-201ENST00000216727 TMEM88BA6NKF7 163 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 APOC4-APOC2K7ER74 178 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 CAND2O75155 1236 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 APOC2P02655 101 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 DESP17661 470 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 ACADSBP45954 432 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 PLCB3Q01970 1234 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 BOLA3Q53S33 107 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 C6orf118Q5T5N4 469 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 GSTCDQ8NEC7 633 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 KLHDC9Q8NEP7 349 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 HSFY1Q96LI6 401 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 CFAP57Q96MR6 1250 aa31.09■■■□□ 2.57
PABPN1-201ENST00000216727 GPR182O15218 404 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 TTC4O95801 387 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 CTSHP09668 335 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 ADORA2BP29275 332 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 DYNLT1P63172 113 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 SLC26A9Q7LBE3 791 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 PRUNE1Q86TP1 453 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 ZCCHC9Q8N567 271 aaKnown RBP31.08■■■□□ 2.57
PABPN1-201ENST00000216727 TEKT4Q8WW24 435 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 TBCBQ99426 244 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 ROPN1BQ9BZX4 212 aaPredicted RBP31.08■■■□□ 2.57
PABPN1-201ENST00000216727 ROPN1Q9HAT0 212 aaPredicted RBP31.08■■■□□ 2.57
PABPN1-201ENST00000216727 ASGR1P07306 291 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 IVLP07476 585 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 HPDP32754 393 aaPredicted RBP31.08■■■□□ 2.57
PABPN1-201ENST00000216727 RFX6Q8HWS3 928 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 SLC2A14Q8TDB8 520 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 TMEM121Q9BTD3 319 aa31.08■■■□□ 2.57
PABPN1-201ENST00000216727 TSPYL2Q9H2G4 693 aaPredicted RBP31.08■■■□□ 2.57
PABPN1-201ENST00000216727 STAU2Q9NUL3 570 aaKnown RBP eCLIP31.08■■■□□ 2.57
PABPN1-201ENST00000216727 CST5P28325 142 aaPredicted RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 MAGOHP61326 146 aaKnown RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 OSTM1Q86WC4 334 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 B3GALNT2Q8NCR0 500 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 CALN1Q9BXU9 219 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 B3GNT5Q9BYG0 378 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 TPX2Q9ULW0 747 aaKnown RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 MDH1P40925 334 aaKnown RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 PTPN9P43378 593 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 CDH6P55285 790 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 PPP2R2AP63151 447 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 PDK2Q15119 407 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 CDO1Q16878 200 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 CCSAPQ6IQ19 270 aaPredicted RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 VSIG1Q86XK7 387 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 FAM172AQ8WUF8 416 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 HNRNPABQ99729 332 aaKnown RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 DDX23Q9BUQ8 820 aaKnown RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 SAE1Q9UBE0 346 aaPredicted RBP31.07■■■□□ 2.56
PABPN1-201ENST00000216727 SLC12A6Q9UHW9 1150 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 GIT1Q9Y2X7 761 aa31.07■■■□□ 2.56
PABPN1-201ENST00000216727 MEIS3P2A8K0S8 358 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 SGK1O00141 431 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 CYB561D2O14569 222 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 ZSCAN5DPP0CG00 497 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 ATP11AP98196 1134 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 GPS1Q13098 491 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 KCNA10Q16322 511 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 RAB6CQ53S08 254 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 CYP4F22Q6NT55 531 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 MAP7D3Q8IWC1 876 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 RAB6CQ9H0N0 254 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 PRDM4Q9UKN5 801 aa31.06■■■□□ 2.56
PABPN1-201ENST00000216727 GABRDO14764 452 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 MLH1P40692 756 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 DPYSL3Q14195 570 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 MORF4L2Q15014 288 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 C11orf84Q9BUA3 381 aaPredicted RBP31.05■■■□□ 2.56
PABPN1-201ENST00000216727 NGRNQ9NPE2 291 aaKnown RBP31.05■■■□□ 2.56
PABPN1-201ENST00000216727 DCDC2CA8MYV0 355 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 THP07101 528 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 ETS1P14921 441 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 TFDP2Q14188 446 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 PAXIP1Q6ZW49 1069 aaPredicted RBP31.05■■■□□ 2.56
PABPN1-201ENST00000216727 MRPL10Q7Z7H8 261 aaKnown RBP31.05■■■□□ 2.56
PABPN1-201ENST00000216727 GAD1Q99259 594 aa31.05■■■□□ 2.56
PABPN1-201ENST00000216727 MAK16Q9BXY0 300 aaKnown RBP31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms