RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 VN1R3Q9BXE9 311 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 EMILIN2Q9BXX0 1053 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 EIF2AQ9BY44 585 aaKnown RBP12.93□□□□□ -0.34
SNU13-201ENST00000215956 MIS12Q9H081 205 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 SLC38A7Q9NVC3 462 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 TAS2R14Q9NYV8 317 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 NXF1Q9UBU9 619 aaKnown RBP12.93□□□□□ -0.34
SNU13-201ENST00000215956 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 PCDHGC3Q9UN70 934 aa12.93□□□□□ -0.34
SNU13-201ENST00000215956 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
SNU13-201ENST00000215956 RECQL4O94761 1208 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 FTCDO95954 541 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 KLRC2P26717 231 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 ELF2Q15723 593 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 ERCC6LQ2NKX8 1250 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 ZC3H14Q6PJT7 736 aaKnown RBP12.92□□□□□ -0.34
SNU13-201ENST00000215956 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 PHF13Q86YI8 300 aaPredicted RBP12.92□□□□□ -0.34
SNU13-201ENST00000215956 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 ZNF564Q8TBZ8 553 aaPredicted RBP12.92□□□□□ -0.34
SNU13-201ENST00000215956 KLHL5Q96PQ7 755 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 NAP1L3Q99457 506 aaPredicted RBP12.92□□□□□ -0.34
SNU13-201ENST00000215956 CNOT8Q9UFF9 292 aaKnown RBP12.92□□□□□ -0.34
SNU13-201ENST00000215956 INPP5FQ9Y2H2 1132 aa12.92□□□□□ -0.34
SNU13-201ENST00000215956 CNPP09543 421 aaKnown RBP12.91□□□□□ -0.34
SNU13-201ENST00000215956 FAM163BP0C2L3 166 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 CD58P19256 250 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 SLC1A1P43005 524 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 SLC11A1P49279 550 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
SNU13-201ENST00000215956 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 NOMO2Q5JPE7 1267 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 ZNF606Q8WXB4 792 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 RSAD2Q8WXG1 361 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 FAM84AQ96KN4 292 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 CAPZA3Q96KX2 299 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 TRAIPQ9BWF2 469 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 LHX5Q9H2C1 402 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 ABCB6Q9NP58 842 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 DNAJB4Q9UDY4 337 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 STK39Q9UEW8 545 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 STRIP2Q9ULQ0 834 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 CA14Q9ULX7 337 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 IPPQ9Y573 584 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 BUB1BO60566 1050 aaPredicted RBP12.91□□□□□ -0.34
SNU13-201ENST00000215956 VDRP11473 427 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 PAX3P23760 479 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 GBP2P32456 591 aaPredicted RBP12.91□□□□□ -0.34
SNU13-201ENST00000215956 CDH5P33151 784 aaPredicted RBP12.91□□□□□ -0.34
SNU13-201ENST00000215956 SNX16P57768 344 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 NOMO3P69849 1222 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 INCA1Q0VD86 236 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 PPP2R5EQ16537 467 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 UBXN11Q5T124 520 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 NAA35Q5VZE5 725 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 SCARA5Q6ZMJ2 495 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 NT5DC3Q86UY8 548 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 CREG2Q8IUH2 290 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 CXorf38Q8TB03 319 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 ARHGEF26Q96DR7 871 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 TMEM176AQ96HP8 235 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 HES6Q96HZ4 224 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 NXF3Q9H4D5 531 aaKnown RBP12.91□□□□□ -0.34
SNU13-201ENST00000215956 OSGEPQ9NPF4 335 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 UBN1Q9NPG3 1134 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 MAN1C1Q9NR34 630 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 DLL3Q9NYJ7 618 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 ADAM22Q9P0K1 906 aa12.91□□□□□ -0.34
SNU13-201ENST00000215956 KCNK3O14649 394 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 B4GALT3O60512 393 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 CILPO75339 1184 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 ERLIN1O75477 346 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 DCNP07585 359 aaKnown RBP12.9□□□□□ -0.34
SNU13-201ENST00000215956 SRFP11831 508 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 ITGA4P13612 1032 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 CD19P15391 556 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 SV2CQ496J9 727 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
SNU13-201ENST00000215956 MON1BQ7L1V2 547 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 UNC93AQ86WB7 457 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 MMGT1Q8N4V1 131 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 CMASQ8NFW8 434 aaPredicted RBP12.9□□□□□ -0.34
SNU13-201ENST00000215956 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 PGBD4Q96DM1 585 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 MMS19Q96T76 1030 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 CARD9Q9H257 536 aa12.9□□□□□ -0.34
SNU13-201ENST00000215956 WDR6Q9NNW5 1121 aaKnown RBP12.9□□□□□ -0.34
SNU13-201ENST00000215956 ACP6Q9NPH0 428 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms