RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 EXTL3O43909 919 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 TRIM16O95361 564 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CBX6O95503 412 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 APRTP07741 180 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 RBP3P10745 1247 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PHKA2P46019 1235 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 TRADDQ15628 312 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 KCTD19Q17RG1 926 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 SGSM1Q2NKQ1 1148 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 WASHC2DQ5SRD0 308 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 SH3BP5LQ7L8J4 393 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 DRAXINQ8NBI3 349 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 LENG1Q96BZ8 264 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 CYP39A1Q9NYL5 469 aa12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 PSMC3IPQ9P2W1 217 aaPredicted RBP12.62□□□□□ -0.39
TSPAN9-201ENST00000011898 F5H423 210 aaPredicted RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 PRKCBP05771 671 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 KRT16P08779 473 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ZNF157P51786 506 aaPredicted RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 SMAD1Q15797 465 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 SEZ6Q53EL9 994 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 GPAT2Q6NUI2 795 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 UTS2BQ765I0 119 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ACSF2Q96CM8 615 aaPredicted RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ADAMTS3O15072 1205 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 MFN2O95140 757 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 HSPA8P11142 646 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 PDGFRAP16234 1089 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 PTPN4P29074 926 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ARPC4P59998 168 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ACAP1Q15027 740 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 TAF1BQ53T94 588 aaPredicted RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 B3GNT6Q6ZMB0 384 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 SLC25A41Q8N5S1 370 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 TRIM33Q9UPN9 1127 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 AP3B1O00203 1094 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 TLR2O60603 784 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 CASP2P42575 452 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 RPL21P46778 160 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 IFI35P80217 286 aaPredicted RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 PRPSAP1Q14558 356 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 FSCBQ5H9T9 825 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 TSHZ1Q6ZSZ6 1077 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 MTDHQ86UE4 582 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 CCDC103Q8IW40 242 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 KRT35Q92764 455 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ELMO3Q96BJ8 720 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 VPS11Q9H270 941 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 KCTD10Q9H3F6 313 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 PCP4L1A6NKN8 68 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 SPOUT1Q5T280 376 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 HEATR6Q6AI08 1181 aaKnown RBP12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 RINLQ6ZS11 566 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 ARHGEF19Q8IW93 802 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 MAGEC3Q8TD91 643 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 SLC5A5Q92911 643 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 FGFBP2Q9BYJ0 223 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 RNPEPQ9H4A4 650 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 BAG5Q9UL15 447 aa12.61□□□□□ -0.39
TSPAN9-201ENST00000011898 TNFAIP2Q03169 654 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 ARMCX2Q7L311 632 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 GPR141Q7Z602 305 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 MCUQ8NE86 351 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 DACH2Q96NX9 599 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 GRIP2Q9C0E4 1043 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 TTYH3Q9C0H2 523 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 TAS2R14Q9NYV8 317 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 PRELID1Q9Y255 219 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 NID2Q14112 1375 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 PLIN4Q96Q06 1357 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 C1orf232A0A0U1RR37 186 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 TMEM150BA6NC51 233 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 TISP43B9A030 160 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 HSPA4LO95757 839 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 EGFRP00533 1210 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 RARAP10276 462 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 KRT4P19013 534 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 CUL2Q13617 745 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 QPCTQ16769 361 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 HGSNATQ68CP4 663 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 SPOPLQ6IQ16 392 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 MARK2Q7KZI7 788 aaKnown RBP12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 ADCK1Q86TW2 530 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
TSPAN9-201ENST00000011898 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms