RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PPARGC1AQ9UBK2 798 aaKnown RBP10.99□□□□□ -0.65
CX3CL1-201ENST00000006053 MARCOQ9UEW3 520 aaPredicted RBP10.99□□□□□ -0.65
CX3CL1-201ENST00000006053 KAT6AQ92794 2004 aa10.99□□□□□ -0.65
CX3CL1-201ENST00000006053 MYH9P35579 1960 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 RBM47A0AV96 593 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 KBTBD13C9JR72 458 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 E5RJQ4 531 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 CAPN15O75808 1086 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 PSAPP07602 524 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 NR3C2P08235 984 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 DLDP09622 509 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 IL1R2P27930 398 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 EIF3EP60228 445 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 KDSRQ06136 332 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 ZBTB33Q86T24 672 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 RBM12BQ8IXT5 1001 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 PPM1NQ8N819 430 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 JOSD2Q8TAC2 188 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 APOPT1Q96IL0 206 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 CGRRF1Q99675 332 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 CALN1Q9BXU9 219 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 TCRBV9S1A1TA0A576 114 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 COPEO14579 308 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 ABLIM1O14639 778 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 AVILO75366 819 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 STBD1O95210 358 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 BAG2O95816 211 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 RBP3P10745 1247 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 SERPINB4P48594 390 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 MYL6P60660 151 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 EMC2Q15006 297 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 PRKD1Q15139 912 aaPredicted RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 SGSM1Q2NKQ1 1148 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 PPP1R2P3Q6NXS1 205 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 KCTD6Q8NC69 237 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 PHC3Q8NDX5 983 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 DDX50Q9BQ39 737 aaKnown RBP10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 DHRS4Q9BTZ2 278 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 PHACTR1Q9C0D0 580 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 SLC38A10Q9HBR0 1119 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 CNTNAP1P78357 1384 aa10.98□□□□□ -0.65
CX3CL1-201ENST00000006053 H0YCG3 227 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 KRT3P12035 628 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 PAX3P23760 479 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 GCLCP48506 637 aaPredicted RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 CACNA2D1P54289 1103 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TMPRSS15P98073 1019 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 R3HDM1Q15032 1099 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TAF5Q15542 800 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 CFAP61Q8NHU2 1237 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 FBXO27Q8NI29 283 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TFAP2BQ92481 460 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ZNF395Q9H8N7 513 aaPredicted RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 CISHQ9NSE2 258 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TRIM49D1C9J1S8 452 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 I3L4J1 428 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 KDELR1P24390 212 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 CCND2P30279 289 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TNFSF9P41273 254 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 OCRLQ01968 901 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 HADHQ16836 314 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 NPNTQ6UXI9 565 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 CDHR3Q6ZTQ4 885 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ARID3BQ8IVW6 561 aaPredicted RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ARHGAP24Q8N264 748 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 WDTC1Q8N5D0 677 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 CCDC110Q8TBZ0 833 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TTC1Q99614 292 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 MTMR12Q9C0I1 747 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 JPH1Q9HDC5 661 aaPredicted RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 PDLIM7Q9NR12 457 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 STX18Q9P2W9 335 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 FETUBQ9UGM5 382 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 RIPK3Q9Y572 518 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TCRBV5S1A1TA0A578 114 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 C3orf70A6NLC5 250 aaPredicted RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 MCF2LO15068 1137 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 DKC1O60832 514 aaKnown RBP eCLIP10.97□□□□□ -0.654e-6■■■■□ 19.6
CX3CL1-201ENST00000006053 LRCH4O75427 683 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ZCCHC18P0CG32 403 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 RARBP10826 455 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ETV4P43268 484 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 NEK3P51956 506 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ACTR2P61160 394 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 DPYSL3Q14195 570 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 OR52E8Q6IFG1 317 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 DARS2Q6PI48 645 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 KBTBD2Q8IY47 623 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 ACAP3Q96P50 834 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 SRPK1Q96SB4 655 aaKnown RBP10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 THTPAQ9BU02 230 aa10.97□□□□□ -0.65
CX3CL1-201ENST00000006053 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms