RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Mocs3A2BDX3 460 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 March10E9PX79 788 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cyp2c69E9PXC3 491 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 AfpP02772 605 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Anxa5P48036 319 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gpatch4Q3TFK5 415 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Zfp78Q5U406 512 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Nr1h2Q60644 446 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 OmpQ64288 163 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 VclQ64727 1066 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Bend6Q6PFX2 281 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ChmlQ9QZD5 621 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Sbno2Q7TNB8 1349 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm4312K9J7E2 289 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Stat3P42227 770 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc11a2P49282 568 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mxi1P50540 228 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Epb41l5Q8BGS1 731 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ccz1Q8C1Y8 480 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Q8CC96 669 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc9a8Q8R4D1 576 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Nphs1Q9QZS7 1256 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 FanceB8JJD6 213 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CraddO88843 199 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Phka1P18826 1241 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cyp4f37Q3V1F1 546 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Adck2Q6NSR3 617 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Baiap2l2Q80Y61 522 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tor1aip2Q8BYU6 502 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Smtnl2Q8CI12 456 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mkl1Q8K4J6 964 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tspan8Q8R3G9 235 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ttc36Q8VBW8 186 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Bcl2l12Q9D3J3 255 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cab39lQ9DB16 337 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Clasp1Q80TV8 1535 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm13078A2AGW8 474 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rad21l1A2AU37 552 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Spin2fJ3QPU0 254 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Setd4P58467 439 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Kctd21Q3URF8 260 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 BC051142Q3V0M8 400 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Fbxo39Q5NBU5 443 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tcf4Q60722 670 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CltbQ6IRU5 229 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tdpoz4Q6YCH2 370 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 TbataQ7TSD4 393 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tmem117Q8BH18 514 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ticam2Q8BJQ4 232 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Zmym6Q8BS54 1249 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Senp7Q8BUH8 1037 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Snx17Q8BVL3 470 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Frmd6Q8C0V9 622 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Arel1Q8CHG5 823 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 DgkgQ91WG7 788 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Atp13a1Q9EPE9 1200 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mtmr1Q9Z2C4 669 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm8011K7N6Y5 207 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 IppP28575 584 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gbx2P48031 348 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ItgaeQ60677 1167 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Kiaa0391Q8JZY4 584 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc26a5Q99NH7 744 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rwdd4Q9CPR1 188 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cnpy3Q9DAU1 276 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Phtf1Q9QZ09 761 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Trpv2Q9WTR1 756 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cacna1dQ99246 2179 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm44511A0A0N4SW10 223 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Sult6b2B7ZWN4 290 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cyp3a25O09158 503 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 BhmtO35490 407 aaKnown RBP9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Clec4fP70194 548 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 PrkcqQ02111 707 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tab3Q571K4 716 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ints2Q80UK8 1198 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Arhgef38Q80VK6 770 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 TbckQ8BM85 762 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Q8C6G1 249 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pcyox1lQ8C7K6 495 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ap3m2Q8R2R9 418 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Emc3Q99KI3 261 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Coro7Q9D2V7 922 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gpn3Q9D3W4 284 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Osbpl3Q9DBS9 855 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tm9sf1Q9DBU0 606 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Dyrk1bQ9Z188 629 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Erbb3Q61526 1339 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Abcb11Q9QY30 1321 aa9.63□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Lonrf1D3YY23 762 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mucl2P02815 138 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CnpP16330 420 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ncf4P97369 339 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ankmy2Q3TPE9 440 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm12258Q5NC63 627 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ints6Q6PCM2 883 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cdkn2aipQ8BI72 563 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pm20d1Q8C165 503 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ppwd1Q8CEC6 646 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Lin7aQ8JZS0 233 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms