RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Gbp8Q2V6D6 525 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Aldh5a1Q8BWF0 523 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Il36gQ8R460 164 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 YarsQ91WQ3 528 aaKnown RBP16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Usp11Q99K46 921 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Prg3Q9JL95 222 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Trpv2Q9WTR1 756 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Asb1Q9WV74 336 aa16.25■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mindy4b-psA0A1W2P7H6 457 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mmp13P33435 472 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 GsrP47791 500 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ptprn2P80560 1001 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 GclcP97494 637 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ddr1Q03146 911 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Fam172aQ3TNH5 417 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Nek10Q3UGM2 1111 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Psg28Q4KL66 472 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 OcrlQ6NVF0 900 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 MogsQ80UM7 834 aaKnown RBP16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Dis3lQ8C0S1 1053 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Zfp449Q8CB76 518 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 MyocdQ8VIM5 935 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ccdc182Q9D9C6 152 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Vwa7Q9JHA8 891 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Krt27Q9Z320 448 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Gm4302E9PX25 294 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 2010300C02RikE9Q3M9 1175 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Vmn2r39L7N2E5 861 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 BtkP35991 659 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 PorP37040 678 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Grb7Q03160 535 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Sox8Q04886 464 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Gm14685Q52KH6 695 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Papss1Q60967 624 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 CybbQ61093 570 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Arhgap10Q6Y5D8 786 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 C2cd2lQ80X80 706 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Slc45a1Q8BIV7 751 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Tmem260Q8BMD6 703 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mbtps2Q8CHX6 515 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Fgfr1op2Q9CRA9 253 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Abcg8Q9DBM0 673 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 PygmQ9WUB3 842 aaKnown RBP16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mbd1Q9Z2E2 636 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ralgapa2A3KGS3 1872 aa16.24■□□□□ 0.19
Vcan-201ENSMUST00000109543 Gm28360A0A087WR25 190 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mroh5E9PUJ8 762 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Rpl21O09167 160 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Anxa8O35640 327 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Nos2P29477 1144 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Aimp1P31230 310 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Scp2P32020 547 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Slc12a1P55014 1095 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 PhbP67778 272 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 IhhP97812 411 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Slc24a2Q14BI1 711 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Znf746Q3U133 652 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Cfap52Q5F201 620 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Suz12Q80U70 741 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Chmp2bQ8BJF9 213 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Calcoco1Q8CGU1 691 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Rassf9Q8K342 435 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Pdik1lQ8QZR7 341 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 OlahQ8R197 265 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Alas1Q8VC19 642 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Cpt1bQ924X2 772 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ppp1r12aQ9DBR7 1029 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Prl2a1Q9JHK0 228 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Tmem59Q9QY73 323 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ank3G5E8K5 1961 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Zfp94E9Q6Y4 486 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mmp3P28862 477 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Tap2P36371 702 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 SftpbP50405 377 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Casp4P70343 373 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Ppp1r1bQ60829 194 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Nuak1Q641K5 658 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Rbl2Q64700 1135 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Scube3Q66PY1 993 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Tas2r102Q7M717 329 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Gga1Q8R0H9 635 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Mtss1Q8R1S4 759 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Thoc1Q8R3N6 657 aaKnown RBP16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Lpin3Q99PI4 848 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Lrrc71Q9D3W5 558 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Kcnq4Q9JK97 696 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 Nfs1Q9Z1J3 459 aa16.23■□□□□ 0.19
Vcan-201ENSMUST00000109543 OsbpQ3B7Z2 805 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Trmt1Q3TX08 663 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Pld5Q3UNN8 536 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Grid1Q61627 1009 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 RetsatQ64FW2 609 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Tcaf3Q6QR59 914 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Prl3a1Q78Y73 227 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Brat1Q8C3R1 822 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Lonp1Q8CGK3 949 aaKnown RBP16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 SncaipQ99ME3 962 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Katnbl1Q9CWJ3 299 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Fam3aQ9D8T0 230 aa16.22■□□□□ 0.19
Vcan-201ENSMUST00000109543 Bace2Q9JL18 514 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms