RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gpr150Q8BL07 427 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gtf3c2Q8BL74 907 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Gpr20Q8BYC4 358 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lrrc19Q8BZT5 364 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Lamtor4Q8CF66 99 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Kat14Q8CID0 779 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Olfr395Q8VGR3 312 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Dhx36Q8VHK9 1001 aaKnown RBP13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 PlvapQ91VC4 438 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Vta1Q9CR26 309 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 Taf7lQ9D3R9 471 aa13.46□□□□□ -0.25
Nup88-203ENSMUST00000108531 0610012G03RikA0A0J9YTR2 95 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Smok3aC0HKC8 504 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Smok3bC0HKC9 504 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Lilra5D3Z7A9 295 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Serpini1O35684 410 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cdh8P97291 799 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Stx2Q00262 289 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Zfyve27Q3TXX3 415 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 OtulinQ3UCV8 352 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atp4aQ64436 1033 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atg9bQ6EBV9 922 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 SrlQ7TQ48 910 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atp6v0d2Q80SY3 350 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Trub1Q8C0D0 338 aaKnown RBP13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rfx6Q8C7R7 927 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Stau2Q8CJ67 570 aaKnown RBP13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Znf426Q8R1D1 550 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ugp2Q91ZJ5 508 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Trps1Q925H1 1281 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Mcrs1Q99L90 462 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Kcnq4Q9JK97 696 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Plod1Q9R0E2 728 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gbp2Q9Z0E6 589 aa13.46□□□□□ -0.26
Nup88-203ENSMUST00000108531 Dicer1Q8R418 1916 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tnfrsf14A0A1W2P7D5 276 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gm12394A2AKP6 982 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Grik3B1AS29 919 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Plekha5E9Q6H8 1269 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 SpibO35906 267 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ptpn11P35235 597 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pdha1P35486 390 aaKnown RBP13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 GsrP47791 500 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 YwhazP63101 245 aaKnown RBP13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Q3TQQ9 903 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Map3k9Q3U1V8 1077 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tpp2Q64514 1262 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Arhgap20Q6IFT4 1182 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Acot5Q6Q2Z6 421 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Fam102aQ78T81 392 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tas2r102Q7M717 329 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Zbtb5Q7TQG0 670 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 N4bp3Q8C7U1 537 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 RnpepQ8VCT3 650 aaKnown RBP13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Polr3cQ9D483 533 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Drc3Q9D5E4 523 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Slc25a19Q9DAM5 318 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Scyl1Q9EQC5 806 aaKnown RBP13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Sfmbt1Q9JMD1 863 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Lrriq4A6H6A4 596 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Zc3h12bG3X9I7 835 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pias1O88907 651 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 IapP03975 557 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Hoxb8P09632 243 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ndufs6P52503 116 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 NcstnP57716 708 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rab6bP61294 208 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 CiitaP79621 1155 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Samhd1Q60710 627 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Grik1Q60934 836 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Eif2dQ61211 570 aaKnown RBP13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cd180Q62192 661 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Olfr1505Q7TQQ2 316 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Mgat5Q8R4G6 740 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rev1Q920Q2 1249 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 CoprsQ9CQ13 173 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Vwa7Q9JHA8 891 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tmem59Q9QY73 323 aa13.45□□□□□ -0.26
Nup88-203ENSMUST00000108531 NrapQ80XB4 1728 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Chil3O35744 398 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 PdgfaP20033 211 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Nsun2Q1HFZ0 757 aaKnown RBP13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tars2Q3UQ84 723 aaKnown RBP13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Fcrl5Q68SN8 596 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rsl1d1Q8BVY0 452 aaKnown RBP13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Snx30Q8CE50 437 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Mtss1Q8R1S4 759 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rabep2Q91WG2 554 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tekt2Q922G7 430 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Xpo5Q924C1 1204 aaKnown RBP13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rnf112Q96DY5 654 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tspan17Q9D7W4 270 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Speer3W4VSP1 261 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Vmn2r103E9PWW0 856 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Morc3F7BJB9 942 aaKnown RBP13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 HdcP23738 662 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Glb1P23780 647 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Stmn2P55821 179 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gabrb2P63137 512 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Znf746Q3U133 652 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms